Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51146 | Soybean | cytosol | 73.23 | 70.05 |
| KRH36518 | Soybean | mitochondrion | 63.13 | 63.78 |
| KRH11501 | Soybean | cytosol, mitochondrion, nucleus, plastid | 65.66 | 62.2 |
| Solyc02g081180.1.1 | Tomato | nucleus | 47.47 | 46.31 |
| GSMUA_Achr3P12970_001 | Banana | cytosol | 38.89 | 44.51 |
| GSMUA_Achr1P18240_001 | Banana | nucleus | 38.89 | 43.75 |
| PGSC0003DMT400043086 | Potato | nucleus | 45.45 | 43.27 |
| PGSC0003DMT400061842 | Potato | mitochondrion | 45.45 | 37.34 |
| Solyc03g031830.1.1 | Tomato | nucleus | 44.44 | 35.92 |
| KRH07558 | Soybean | nucleus | 12.63 | 9.54 |
| KRH66042 | Soybean | nucleus | 12.63 | 9.16 |
| KRG99707 | Soybean | nucleus | 14.14 | 7.84 |
| KRH46683 | Soybean | nucleus | 13.64 | 7.61 |
Protein Annotations
| EMBL:ACUP02010293 | EnsemblPlants:KRH02010 | EnsemblPlantsGene:GLYMA_17G009900 | EntrezGene:100792613 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR12183 | PANTHER:PTHR12183:SF20 | PFAM:PF13920 |
| PFscan:PS50089 | ProteinID:KRH02010 | ProteinID:KRH02010.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI000233F36B | UniProt:I1MR22 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:795965..796561
Molecular Weight (calculated)
21731.1 Da
IEP (calculated)
7.605
GRAVY (calculated)
-0.344
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQLGLILQE SLRTEREART ILGLLTEQMD SVGRGQRRRR TLKERLRFTG IGCCGATWVF RPIVRDEGGG AQAQQQPQET NAGQDPNHTG PEHVGPSQSS
101: SGMNLAAALA AERQFREGEG TPLRVSLMRL LEETEGGDAA VEAVGNDWVC CVCMGRKKGA AFIPCGHTFC RVCSRELWLN RGTCPLCNRS ILEILDIF
101: SGMNLAAALA AERQFREGEG TPLRVSLMRL LEETEGGDAA VEAVGNDWVC CVCMGRKKGA AFIPCGHTFC RVCSRELWLN RGTCPLCNRS ILEILDIF
001: MSQLGVETSQ AQPETPQSTT FLDLLRLQMD GLDRSRRRKR TLKERLGFKR IGCCGPTWGL RLTSNTGEDD DEPFENRLVS GSDHVTGPLN QGMNLATALA
101: AERNYRTEET EASGSLTPLK VSLMRLLEET AERVVVEENE TERVTASASS TVRGVNNDSV CCVCMGRKKG AAFIPCGHTF CRVCSREVWL NRGSCPLCNR
201: PIIEILDIY
101: AERNYRTEET EASGSLTPLK VSLMRLLEET AERVVVEENE TERVTASASS TVRGVNNDSV CCVCMGRKKG AAFIPCGHTF CRVCSREVWL NRGSCPLCNR
201: PIIEILDIY
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5XV87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.