Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36518 | Soybean | mitochondrion | 73.68 | 78.57 |
| KRH02010 | Soybean | cytosol | 62.2 | 65.66 |
| KRH51146 | Soybean | cytosol | 59.33 | 59.9 |
| GSMUA_Achr1P18240_001 | Banana | nucleus | 39.71 | 47.16 |
| Solyc02g081180.1.1 | Tomato | nucleus | 45.45 | 46.8 |
| PGSC0003DMT400043086 | Potato | nucleus | 45.93 | 46.15 |
| GSMUA_Achr3P12970_001 | Banana | cytosol | 37.8 | 45.66 |
| AT1G62370.1 | Thale cress | cytosol | 40.19 | 41.18 |
| Solyc03g031830.1.1 | Tomato | nucleus | 43.54 | 37.14 |
| PGSC0003DMT400061842 | Potato | mitochondrion | 42.11 | 36.51 |
| Bra034501.1-P | Field mustard | cytosol | 36.84 | 36.49 |
| CDY08650 | Canola | cytosol | 36.84 | 36.49 |
| CDY32036 | Canola | cytosol | 36.36 | 36.02 |
| KRH07558 | Soybean | nucleus | 11.48 | 9.16 |
| KRH66042 | Soybean | nucleus | 11.48 | 8.79 |
| KRH46683 | Soybean | nucleus | 11.48 | 6.76 |
| KRG99707 | Soybean | nucleus | 11.0 | 6.44 |
Protein Annotations
| EMBL:ACUP02009213 | EnsemblPlants:KRH11501 | EnsemblPlantsGene:GLYMA_15G112600 | EntrezGene:100804959 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR12183 | PANTHER:PTHR12183:SF35 | PFAM:PF13920 |
| PFscan:PS50089 | ProteinID:KRH11501 | ProteinID:KRH11501.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI000233C003 | UniProt:I1MFL5 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:8864042..8865005
Molecular Weight (calculated)
22647.1 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.366
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQLGVALQE SLRTQREARS TILGLLREQM DGVDGGTRRR RSLKERFGFI GMGCCGASWG FRSDALSVNQ GEQEQQQETD PGRVAAPECV GPAGSGSGMN
101: LAAALAAERQ LRVPQEEGGG VRAPWRVSLM RLLEETEGGD AATAEKEKEK EENVLGNDSV CCVCMGRKKG AALIPCGHTF CRVCSRELWL NRGSCPLCNR
201: SILEILDIF
101: LAAALAAERQ LRVPQEEGGG VRAPWRVSLM RLLEETEGGD AATAEKEKEK EENVLGNDSV CCVCMGRKKG AALIPCGHTF CRVCSRELWL NRGSCPLCNR
201: SILEILDIF
001: MSQLGVETSQ AQPETPQSTT FLDLLRLQMD GLDRSRRRKR TLKERLGFKR IGCCGPTWGL RLTSNTGEDD DEPFENRLVS GSDHVTGPLN QGMNLATALA
101: AERNYRTEET EASGSLTPLK VSLMRLLEET AERVVVEENE TERVTASASS TVRGVNNDSV CCVCMGRKKG AAFIPCGHTF CRVCSREVWL NRGSCPLCNR
201: PIIEILDIY
101: AERNYRTEET EASGSLTPLK VSLMRLLEET AERVVVEENE TERVTASASS TVRGVNNDSV CCVCMGRKKG AAFIPCGHTF CRVCSREVWL NRGSCPLCNR
201: PIIEILDIY
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5XV87]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.