Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU4Hr1G069780.1 | Barley | nucleus | 70.79 | 75.0 |
HORVU5Hr1G123180.1 | Barley | cytosol, nucleus | 69.66 | 65.26 |
TraesCS3D01G419000.1 | Wheat | cytosol, mitochondrion, nucleus | 50.0 | 35.74 |
TraesCS3B01G459700.1 | Wheat | cytosol, mitochondrion, nucleus | 47.19 | 33.33 |
HORVU3Hr1G093580.1 | Barley | plastid | 50.0 | 32.13 |
TraesCS3A01G423800.1 | Wheat | cytosol | 41.01 | 28.63 |
Bra015092.1-P | Field mustard | nucleus | 32.58 | 28.02 |
HORVU5Hr1G075810.1 | Barley | mitochondrion, nucleus | 29.21 | 27.37 |
Solyc06g007880.1.1 | Tomato | nucleus | 26.97 | 25.81 |
GSMUA_Achr8P00880_001 | Banana | nucleus | 36.52 | 24.34 |
CDX77379 | Canola | cytosol | 33.71 | 24.0 |
PGSC0003DMT400003096 | Potato | nucleus | 26.4 | 23.5 |
CDY69745 | Canola | cytosol | 31.46 | 22.86 |
AT3G25030.4 | Thale cress | cytosol | 32.02 | 22.8 |
EES04107 | Sorghum | nucleus | 37.64 | 22.79 |
CDY05318 | Canola | nucleus | 26.97 | 22.64 |
Bra001236.1-P | Field mustard | nucleus | 28.09 | 22.62 |
CDY24647 | Canola | nucleus | 26.97 | 22.54 |
Bra029623.1-P | Field mustard | nucleus | 26.97 | 22.43 |
Zm00001d012045_P001 | Maize | cytosol, mitochondrion, nucleus | 36.52 | 21.74 |
Os01t0917900-01 | Rice | nucleus | 38.2 | 21.73 |
Zm00001d042359_P001 | Maize | cytosol, mitochondrion, nucleus | 37.08 | 21.57 |
KRH07558 | Soybean | nucleus | 30.34 | 20.61 |
KRH66042 | Soybean | nucleus | 30.9 | 20.15 |
AT4G13100.2 | Thale cress | extracellular | 29.78 | 20.0 |
HORVU7Hr1G053470.4 | Barley | cytosol, mitochondrion, plastid | 28.09 | 18.59 |
VIT_00s0186g00090.t01 | Wine grape | cytosol, nucleus, plastid | 32.58 | 17.79 |
AT3G07120.1 | Thale cress | nucleus | 30.9 | 15.28 |
CDX74062 | Canola | cytosol, nucleus, plastid | 28.65 | 15.09 |
Bra040362.1-P | Field mustard | nucleus | 29.21 | 15.03 |
HORVU3Hr1G064710.1 | Barley | cytosol | 15.17 | 7.87 |
Protein Annotations
EnsemblPlants:HORVU1Hr1G049430.2 | EnsemblPlantsGene:HORVU1Hr1G049430 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR12183 | PANTHER:PTHR12183:SF22 | PFAM:PF13920 | PFscan:PS50089 | SEG:seg |
SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000B47BC99 | UniProt:A0A287FH39 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr1H:-:365989375..365989963
Molecular Weight (calculated)
19487.0 Da
IEP (calculated)
6.612
GRAVY (calculated)
-0.587
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: LSGIMAYPFL EEPRRGLVVG EMRPRRRRGP VVETRIVGPT RGGADDRDGA GRASTDRGRS GAWGGRIGTR GRPAATASTS LMTLLEQADG HSDESGELGG
101: ASRCGAVDDN EEDGHRERHE EEEEEEVQVC CVCMVRHKGA AFIPCGHTFC RLCSRELRHT RGNCPLCNVF IQDILHIF
101: ASRCGAVDDN EEDGHRERHE EEEEEEVQVC CVCMVRHKGA AFIPCGHTFC RLCSRELRHT RGNCPLCNVF IQDILHIF
001: MIQMDGGDRL RVTLLDRMST VENGRSSVTL EDILMAETSS FRSLTTPTTP VRNHSSSSLL DVMRRERRRD KTAWKSLRDK LRLKRTATGW ISSNPIPTLD
101: NHILTPDNDS HRFNRLGFLL TNSETNRSSR DVSDAAEEAA EREGRLRLGT VLAAEREPPR MSLMELLEDN DGHMYELSAR DEVEVEGRDG CDGGGEAVAV
201: TGAAELGCCV CMVRSKGAAF IPCGHTFCRL CSRELWVQRG NCPLCNTAIL QVLDIF
101: NHILTPDNDS HRFNRLGFLL TNSETNRSSR DVSDAAEEAA EREGRLRLGT VLAAEREPPR MSLMELLEDN DGHMYELSAR DEVEVEGRDG CDGGGEAVAV
201: TGAAELGCCV CMVRSKGAAF IPCGHTFCRL CSRELWVQRG NCPLCNTAIL QVLDIF
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JS86]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.