Factsheet for HORVU7Hr1G053470.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G257600.1	Wheat	nucleus	56.13	56.98
TraesCS7D01G258600.1	Wheat	nucleus	52.79	53.58
TraesCS7B01G154600.1	Wheat	nucleus	51.3	52.47
HORVU5Hr1G075810.1	Barley	mitochondrion, nucleus	29.37	41.58
Zm00001d031586_P001	Maize	cytosol	33.09	35.6
Solyc06g007880.1.1	Tomato	nucleus	19.7	28.49
HORVU1Hr1G049430.2	Barley	cytosol, nucleus, plastid	18.59	28.09
GSMUA_Achr5P25250_001	Banana	cytosol	26.77	26.67
HORVU4Hr1G069780.1	Barley	nucleus	16.36	26.19
Bra015092.1-P	Field mustard	nucleus	20.07	26.09
CDY69745	Canola	cytosol	23.05	25.31
HORVU5Hr1G123180.1	Barley	cytosol, nucleus	17.84	25.26
AT3G25030.4	Thale cress	cytosol	23.42	25.2
PGSC0003DMT400003096	Potato	nucleus	18.59	25.0
CDX77379	Canola	cytosol	22.3	24.0
KRH07558	Soybean	nucleus	21.93	22.52
AT4G13100.2	Thale cress	extracellular	21.93	22.26
HORVU3Hr1G093580.1	Barley	plastid	21.93	21.3
KRH66042	Soybean	nucleus	21.56	21.25
CDY05318	Canola	nucleus	15.99	20.28
VIT_00s0186g00090.t01	Wine grape	cytosol, nucleus, plastid	24.16	19.94
Bra001236.1-P	Field mustard	nucleus	16.36	19.91
CDY24647	Canola	nucleus	15.61	19.72
Bra029623.1-P	Field mustard	nucleus	15.61	19.63
OQU80845	Sorghum	mitochondrion	34.2	19.21
Bra040362.1-P	Field mustard	nucleus	19.33	15.03
CDX74062	Canola	cytosol, nucleus, plastid	18.22	14.5
AT3G07120.1	Thale cress	nucleus	18.96	14.17
HORVU3Hr1G064710.1	Barley	cytosol	15.24	11.95

Protein Annotations

EnsemblPlants:HORVU7Hr1G053470.4	EnsemblPlantsGene:HORVU7Hr1G053470	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	PANTHER:PTHR12183	PANTHER:PTHR12183:SF17	PFAM:PF13920	PFscan:PS50089
ScanProsite:PS00518	SEG:seg	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI000B478822	UniProt:A0A287WIS0
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:209551739..209552647

Molecular Weight (calculated)

26040.6 Da

IEP (calculated)

5.418

GRAVY (calculated)

-0.238

Length

269 amino acids

Sequence
(BLAST)

001: GGEGAAAQRH AGGPAGRRGP ASRRAPGAAG LLQPPRPAQA ARRGXXXXXX XXXXXXXXXX DDGRRAAAVT LASAMQADRR ASSSPPSSSA AVAAAAARTL
101: LDIIRDDQPA VVAAADPFVR RAVSLPAPQT ASSPALTAPV APPPQLTTDR EEEEQGERVS LMALLEQTER QWSAGATAQQ EQEQEPVVAV AASERSSQDQ
201: DALVPEDDAE LPEPGRGAGC CCVCMARAKG AAFIPCGHTF CRACARELLA VRGRCPLCNA AILDVLDIF

Best Arabidopsis Sequence Match ( AT3G25030.3 )
(BLAST)

001: MIQMDGGDRL RVTLLDRMST VESSRSCLTL EAILMADKNR TSPQILSPPP SRSQSNRSLV EVMQREHRHS RDKTAWKSLR EKLRLKQEAS SVEGRIRLGA
101: VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN
201: TTILEVLDLF

Arabidopsis Description

At3g25030 [Source:UniProtKB/TrEMBL;Acc:Q9LJR9]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.