Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g007880.1.1 | Tomato | nucleus | 74.0 | 79.57 |
| GSMUA_Achr8P08650_001 | Banana | nucleus | 24.5 | 51.58 |
| HORVU5Hr1G075810.1 | Barley | mitochondrion, nucleus | 26.0 | 27.37 |
| PGSC0003DMT400077589 | Potato | nucleus | 34.0 | 26.67 |
| HORVU1Hr1G049430.2 | Barley | cytosol, nucleus, plastid | 23.5 | 26.4 |
| TraesCS5D01G291000.1 | Wheat | cytosol, mitochondrion, nucleus | 26.0 | 26.0 |
| HORVU4Hr1G069780.1 | Barley | nucleus | 21.5 | 25.6 |
| TraesCS5B01G282300.1 | Wheat | cytosol, mitochondrion, nucleus | 25.0 | 25.51 |
| TraesCS5A01G283800.1 | Wheat | mitochondrion, nucleus, peroxisome | 24.0 | 25.26 |
| Zm00001d021038_P001 | Maize | nucleus | 23.0 | 25.0 |
| HORVU5Hr1G123180.1 | Barley | cytosol, nucleus | 23.5 | 24.74 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 28.5 | 24.26 |
| EES04107 | Sorghum | nucleus | 35.5 | 24.15 |
| GSMUA_Achr8P00880_001 | Banana | nucleus | 32.0 | 23.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.5 | 23.68 |
| OQU89743 | Sorghum | mitochondrion, nucleus, plastid | 24.5 | 23.56 |
| Zm00001d006078_P001 | Maize | nucleus | 22.5 | 23.44 |
| GSMUA_Achr5P25250_001 | Banana | cytosol | 31.0 | 22.96 |
| TraesCS3D01G419000.1 | Wheat | cytosol, mitochondrion, nucleus | 27.5 | 22.09 |
| Zm00001d012045_P001 | Maize | cytosol, mitochondrion, nucleus | 33.0 | 22.07 |
| TraesCS3A01G423800.1 | Wheat | cytosol | 27.5 | 21.57 |
| Os09t0505000-00 | Rice | nucleus | 23.0 | 21.5 |
| KRH66042 | Soybean | nucleus | 29.0 | 21.25 |
| Os01t0917900-01 | Rice | nucleus | 33.0 | 21.09 |
| Zm00001d031586_P001 | Maize | cytosol | 26.0 | 20.8 |
| KRH07558 | Soybean | nucleus | 27.0 | 20.61 |
| Zm00001d042359_P001 | Maize | cytosol, mitochondrion, nucleus | 31.0 | 20.26 |
| TraesCS3B01G459700.1 | Wheat | cytosol, mitochondrion, nucleus | 25.5 | 20.24 |
| TraesCS7B01G154600.1 | Wheat | nucleus | 26.0 | 19.77 |
| TraesCS7A01G257600.1 | Wheat | nucleus | 26.0 | 19.62 |
| TraesCS7D01G258600.1 | Wheat | nucleus | 26.0 | 19.62 |
| HORVU7Hr1G053470.4 | Barley | cytosol, mitochondrion, plastid | 25.0 | 18.59 |
| HORVU3Hr1G093580.1 | Barley | plastid | 25.0 | 18.05 |
| TraesCS3D01G259900.1 | Wheat | nucleus | 17.0 | 12.55 |
| TraesCS3A01G259800.1 | Wheat | nucleus | 17.0 | 12.45 |
| HORVU3Hr1G064710.1 | Barley | cytosol | 20.5 | 11.95 |
| OQU80845 | Sorghum | mitochondrion | 28.0 | 11.69 |
| PGSC0003DMT400043086 | Potato | nucleus | 11.5 | 11.06 |
| PGSC0003DMT400061842 | Potato | mitochondrion | 13.0 | 10.79 |
| PGSC0003DMT400001832 | Potato | nucleus | 7.0 | 8.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400003096 | EnsemblPlantsGene:PGSC0003DMG400001230 | EntrezGene:107059237 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR12183 | PANTHER:PTHR12183:SF20 | PFAM:PF13920 |
| PFscan:PS50089 | PGSC:PGSC0003DMG400001230 | RefSeq:XP_015161213.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI0002968E32 | UniProt:M0ZL53 | MapMan:35.2 | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400001230]
Coordinates
chr6:+:2197329..2198946
Molecular Weight (calculated)
22077.0 Da
IEP (calculated)
3.999
GRAVY (calculated)
-0.883
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSITTSTSD IPINQGNNRS INRRLSARFP SSKDATYPDD IGNEFGSRNR TLNRNASKAQ RGSPSTKFDP SMSMRRSETG SECEEDESEE EENEEESAEE
101: GEETKEGEEP VRMSLMALLA ESEGSSYMMG EDEDDDEDDG GGDVGGDNLN NCCVCQVRHK GAAFVPCGHS FCRLCSRELW VEGANCPLCN NFILEILDIF
101: GEETKEGEEP VRMSLMALLA ESEGSSYMMG EDEDDDEDDG GGDVGGDNLN NCCVCQVRHK GAAFVPCGHS FCRLCSRELW VEGANCPLCN NFILEILDIF
001: MIQMDGGDRL RVTLLDRMST VESSRSCLTL EAILMADKNR TSPQILSPPP SRSQSNRSLV EVMQREHRHS RDKTAWKSLR EKLRLKQEAS SVEGRIRLGA
101: VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN
201: TTILEVLDLF
101: VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN
201: TTILEVLDLF
Arabidopsis Description
At3g25030 [Source:UniProtKB/TrEMBL;Acc:Q9LJR9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.