Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G141300.1 | Wheat | cytosol | 96.15 | 97.28 |
| TraesCS6D01G130700.1 | Wheat | cytosol | 94.23 | 95.33 |
| TraesCS6B01G169600.1 | Wheat | cytosol | 93.85 | 94.94 |
| Zm00001d015355_P001 | Maize | cytosol | 76.54 | 75.09 |
| OQU84434 | Sorghum | endoplasmic reticulum, vacuole | 81.15 | 72.76 |
| Os02t0168000-02 | Rice | plasma membrane | 78.85 | 70.21 |
| KRH73493 | Soybean | cytosol | 58.46 | 63.87 |
| VIT_06s0009g02490.t01 | Wine grape | cytosol, nucleus, peroxisome | 59.62 | 63.79 |
| KRH14650 | Soybean | cytosol, nucleus, peroxisome | 57.69 | 63.03 |
| CDY01311 | Canola | cytosol | 58.85 | 62.45 |
| AT1G21840.1 | Thale cress | cytosol | 57.31 | 62.08 |
| Bra012296.1-P | Field mustard | cytosol | 58.46 | 62.04 |
| PGSC0003DMT400062329 | Potato | cytosol | 56.92 | 61.16 |
| Solyc03g031430.1.1 | Tomato | cytosol | 56.92 | 61.16 |
| TraesCS6A01G141400.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 61.92 | 56.89 |
| GSMUA_Achr6P21580_001 | Banana | cytosol, plastid | 65.0 | 54.34 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G027660.9 | EnsemblPlantsGene:HORVU6Hr1G027660 | Gene3D:1.10.4190.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016151 | GO:GO:1905182 | InterPro:IPR038277 | InterPro:UreF |
| InterPro:UreF_sf | PANTHER:PTHR33620 | PANTHER:PTHR33620:SF1 | PFAM:PF01730 | PIRSF:PIRSF009467 | UniParc:UPI000B47C09D |
| UniProt:A0A287TPJ8 | MapMan:4.2.1.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:109672545..109673466
Molecular Weight (calculated)
28566.2 Da
IEP (calculated)
5.579
GRAVY (calculated)
0.094
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: ILMERDHSAL KKMRLDDAED SAISQVPAAA SSSMNQQLFW SQWQLLDSIL PTGGFAHSYG LEAAMQSRIV NNPEDLWLFL IQVLDNIGSL LLPFVYCAGR
101: SPDAAAWVKL DQLLDATLTN EVGRKASTSQ GSALLRVAAS VFTEIQSLQD LRRTFLGSTS VSFHHAPIFG LICGLVGFDS ETTQRAYMFV AMRDVISAAT
201: RLNLIGPLAA SVLQHQVAPD AEKMLQKWRD RDVSEASQTA PLLDALQGCH AYMFSRLFCS
101: SPDAAAWVKL DQLLDATLTN EVGRKASTSQ GSALLRVAAS VFTEIQSLQD LRRTFLGSTS VSFHHAPIFG LICGLVGFDS ETTQRAYMFV AMRDVISAAT
201: RLNLIGPLAA SVLQHQVAPD AEKMLQKWRD RDVSEASQTA PLLDALQGCH AYMFSRLFCS
001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
Arabidopsis Description
UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.