Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- peroxisome 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0009g02490.t01 | Wine grape | cytosol, nucleus, peroxisome | 50.8 | 65.02 |
| HORVU6Hr1G027660.9 | Barley | cytosol | 54.34 | 65.0 |
| PGSC0003DMT400062329 | Potato | cytosol | 50.48 | 64.88 |
| KRH73493 | Soybean | cytosol | 49.52 | 64.71 |
| Solyc03g031430.1.1 | Tomato | cytosol | 50.16 | 64.46 |
| TraesCS6A01G141300.1 | Wheat | cytosol | 53.05 | 64.2 |
| AT1G21840.1 | Thale cress | cytosol | 49.52 | 64.17 |
| TraesCS6B01G169600.1 | Wheat | cytosol | 52.73 | 63.81 |
| TraesCS6D01G130700.1 | Wheat | cytosol | 52.73 | 63.81 |
| KRH14650 | Soybean | cytosol, nucleus, peroxisome | 48.23 | 63.03 |
| Bra012296.1-P | Field mustard | cytosol | 49.2 | 62.45 |
| CDY01311 | Canola | cytosol | 48.87 | 62.04 |
| Zm00001d015355_P001 | Maize | cytosol | 52.41 | 61.51 |
| OQU84434 | Sorghum | endoplasmic reticulum, vacuole | 54.02 | 57.93 |
| Os02t0168000-02 | Rice | plasma membrane | 53.7 | 57.19 |
| TraesCS6A01G141400.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 38.59 | 42.4 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P21580_001 | EnsemblPlants:GSMUA_Achr6T21580_001 | EnsemblPlantsGene:GSMUA_Achr6G21580_001 | Gene3D:1.10.4190.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016151 | GO:GO:1905182 | InterPro:IPR038277 |
| InterPro:UreF | InterPro:UreF_sf | PANTHER:PTHR33620 | PANTHER:PTHR33620:SF1 | PFAM:PF01730 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000295A10D | UniProt:M0T906 | MapMan:4.2.1.3.2 | : | : |
Description
Putative Urease accessory protein ureF [Source:GMGC_GENE;Acc:GSMUA_Achr6G21580_001]
Coordinates
chr6:-:18031835..18034913
Molecular Weight (calculated)
34503.9 Da
IEP (calculated)
8.148
GRAVY (calculated)
0.019
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMWEGCPSS LVGAARQLAR RSKQPALFLG FVWSPRRRGG VDREEAVRSI GVDSSCDRAR SRRCKQMVKL TFDDGATDGM HEQLGSELLQ WRQWQLLDSV
101: LPTGGFAHSY GLEAAIQTTF VTNPIDLKSY IVQVLENTGS LLLPFVYCAC KSPDIVAWSK LDRLLEATLT NEVSRKASAS QGSALLRVAA SVYLEVPSLK
201: EMRDKFLGSG SVYFHHAPIF GLICGFLGFD SSTTQRMYMF MAMRDVISAA TRLNLVGPLG ASVLQHQLAL VAEEMMKKWM DRPVDEACQV APMLDVVQGC
301: HQYLFSRLFC S
101: LPTGGFAHSY GLEAAIQTTF VTNPIDLKSY IVQVLENTGS LLLPFVYCAC KSPDIVAWSK LDRLLEATLT NEVSRKASAS QGSALLRVAA SVYLEVPSLK
201: EMRDKFLGSG SVYFHHAPIF GLICGFLGFD SSTTQRMYMF MAMRDVISAA TRLNLVGPLG ASVLQHQLAL VAEEMMKKWM DRPVDEACQV APMLDVVQGC
301: HQYLFSRLFC S
001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
Arabidopsis Description
UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.