Factsheet for TraesCS6A01G141300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G027660.9	Barley	cytosol	97.28	96.15
TraesCS6D01G130700.1	Wheat	cytosol	95.72	95.72
TraesCS6B01G169600.1	Wheat	cytosol	94.55	94.55
Zm00001d015355_P001	Maize	cytosol	77.04	74.72
OQU84434	Sorghum	endoplasmic reticulum, vacuole	82.49	73.1
Os02t0168000-02	Rice	plasma membrane	79.38	69.86
KRH73493	Soybean	cytosol	59.14	63.87
KRH14650	Soybean	cytosol, nucleus, peroxisome	58.37	63.03
VIT_06s0009g02490.t01	Wine grape	cytosol, nucleus, peroxisome	59.53	62.96
AT1G21840.1	Thale cress	cytosol	57.2	61.25
CDY01311	Canola	cytosol	58.37	61.22
Bra012296.1-P	Field mustard	cytosol	57.98	60.82
PGSC0003DMT400062329	Potato	cytosol	57.2	60.74
Solyc03g031430.1.1	Tomato	cytosol	57.2	60.74
TraesCS6A01G141400.1	Wheat	cytosol, endoplasmic reticulum, plastid	62.65	56.89
GSMUA_Achr6P21580_001	Banana	cytosol, plastid	64.2	53.05

Protein Annotations

EnsemblPlants:TraesCS6A01G141300.1	EnsemblPlantsGene:TraesCS6A01G141300	Gene3D:1.10.4190.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0006807
GO:GO:0008150	GO:GO:0008152	GO:GO:0016151	InterPro:IPR038277	InterPro:UreF	InterPro:UreF_sf
PANTHER:PTHR33620	PANTHER:PTHR33620:SF1	PFAM:PF01730	PIRSF:PIRSF009467	MapMan:4.2.1.3.2	:

Description

No Description!

Coordinates

chr6A:+:116580999..116586297

Molecular Weight (calculated)

28361.0 Da

IEP (calculated)

5.590

GRAVY (calculated)

0.035

Length

257 amino acids

Sequence
(BLAST)

001: MERDHSALKK MRLDDTEDSA ISQVPAMASS MNQELFWSQW QLLDSILPTG GFAHSYGLEA AMQSRIVNNQ EDLRLFLIQV VDNIGSLLLP FVYCASRSPD
101: AAAWVKLDQL LDATLTNEVG RKASTSQGSA LLRVAASVFT EIQSLQDLRR TFLGSTSVSF HHAPIFGLIC GLVGFDSETT QRAYMFVAMR DVISAATRLN
201: LIGPLAASVL QHQVAPDAEK MLQKWRDRDV SEASQTAPLL DALQGCHAYM FSRLFCS

Best Arabidopsis Sequence Match ( AT1G21840.2 )
(BLAST)

001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS

Arabidopsis Description

UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.