Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 2
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G141300.1 | Wheat | cytosol | 56.89 | 62.65 |
| HORVU6Hr1G027660.9 | Barley | cytosol | 56.89 | 61.92 |
| OQU84434 | Sorghum | endoplasmic reticulum, vacuole | 53.71 | 52.41 |
| Zm00001d015355_P001 | Maize | cytosol | 48.41 | 51.7 |
| KRH73493 | Soybean | cytosol | 41.7 | 49.58 |
| KRH14650 | Soybean | cytosol, nucleus, peroxisome | 40.99 | 48.74 |
| Os02t0168000-02 | Rice | plasma membrane | 49.82 | 48.29 |
| CDY01311 | Canola | cytosol | 40.64 | 46.94 |
| Bra012296.1-P | Field mustard | cytosol | 39.93 | 46.12 |
| AT1G21840.1 | Thale cress | cytosol | 38.87 | 45.83 |
| VIT_06s0009g02490.t01 | Wine grape | cytosol, nucleus, peroxisome | 38.87 | 45.27 |
| Solyc03g031430.1.1 | Tomato | cytosol | 38.52 | 45.04 |
| PGSC0003DMT400062329 | Potato | cytosol | 37.81 | 44.21 |
| GSMUA_Achr6P21580_001 | Banana | cytosol, plastid | 42.4 | 38.59 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G141400.1 | EnsemblPlantsGene:TraesCS6A01G141400 | Gene3D:1.10.4190.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016151 | InterPro:IPR038277 | InterPro:UreF | InterPro:UreF_sf |
| PANTHER:PTHR33620 | PFAM:PF01730 | MapMan:4.2.1.3.2 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:116584951..116585802
Molecular Weight (calculated)
31750.5 Da
IEP (calculated)
8.155
GRAVY (calculated)
0.176
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLNSSEKLP LPSRPQPPFW YSSPLSSFSM HPILWIISRN NVGLNIIVDA VRFGITGSRA KKQLEFIIQV LENIVSLLLL FVYCASRSPD AAAWIRLDQL
101: LDATLTNEVG RKAFTSQGSA LLRVAASVFT EIQSLQDLRR TFLCSTNVSF HHAPTFGLIC GLVGFDSETT PRAYMFVTMR DVISLATMFN LIGPLAALVL
201: QHQVTPDAEK KLQKWRDRDV SEASQTASLF DTLQGCHGLG CFAPDNEFRF HIFPSLMLYN VFKHTQQRAQ IHGTCIIHAF ILF
101: LDATLTNEVG RKAFTSQGSA LLRVAASVFT EIQSLQDLRR TFLCSTNVSF HHAPTFGLIC GLVGFDSETT PRAYMFVTMR DVISLATMFN LIGPLAALVL
201: QHQVTPDAEK KLQKWRDRDV SEASQTASLF DTLQGCHGLG CFAPDNEFRF HIFPSLMLYN VFKHTQQRAQ IHGTCIIHAF ILF
001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
Arabidopsis Description
UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.