Factsheet for AT1G21840.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012296.1-P	Field mustard	cytosol	86.25	84.49
CDY01311	Canola	cytosol	85.83	84.08
Solyc03g031430.1.1	Tomato	cytosol	68.33	67.77
VIT_06s0009g02490.t01	Wine grape	cytosol, nucleus, peroxisome	67.92	67.08
KRH14650	Soybean	cytosol, nucleus, peroxisome	65.42	65.97
KRH73493	Soybean	cytosol	65.42	65.97
PGSC0003DMT400062329	Potato	cytosol	66.25	65.7
HORVU6Hr1G027660.9	Barley	cytosol	62.08	57.31
TraesCS6A01G141300.1	Wheat	cytosol	61.25	57.2
TraesCS6B01G169600.1	Wheat	cytosol	60.83	56.81
TraesCS6D01G130700.1	Wheat	cytosol	60.83	56.81
Zm00001d015355_P001	Maize	cytosol	61.67	55.85
Os02t0168000-02	Rice	plasma membrane	63.33	52.05
OQU84434	Sorghum	endoplasmic reticulum, vacuole	62.5	51.72
GSMUA_Achr6P21580_001	Banana	cytosol, plastid	64.17	49.52
TraesCS6A01G141400.1	Wheat	cytosol, endoplasmic reticulum, plastid	45.83	38.87

Protein Annotations

Gene3D:1.10.4190.10	MapMan:4.2.1.3.2	EntrezGene:838786	ProteinID:AAD41438.1	ProteinID:AAF16528.1	ProteinID:AEE30161.1
EMBL:AK175196	ProteinID:ANM60497.1	ArrayExpress:AT1G21840	EnsemblPlantsGene:AT1G21840	RefSeq:AT1G21840	TAIR:AT1G21840
RefSeq:AT1G21840-TAIR-G	EnsemblPlants:AT1G21840.1	TAIR:AT1G21840.1	Unigene:At.49902	EMBL:BT012628	GO:GO:0003674
GO:GO:0005488	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016151	GO:GO:1905182
EMBL:HM369062	InterPro:IPR038277	RefSeq:NP_001322780.1	RefSeq:NP_173602.1	PFAM:PF01730	PIRSF:PIRSF009467
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PANTHER:PTHR33620	PANTHER:PTHR33620:SF1	UniProt:Q9XHZ3	UniParc:UPI00000A97E2	Symbol:UREF
InterPro:UreF	InterPro:UreF_sf	:	:	:	:

Description

UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]

Coordinates

chr1:+:7666414..7667758

Molecular Weight (calculated)

26404.9 Da

IEP (calculated)

6.075

GRAVY (calculated)

0.138

Length

240 amino acids

Sequence
(BLAST)

001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.