Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G130700.1 | Wheat | cytosol | 97.28 | 97.28 |
| TraesCS6A01G141300.1 | Wheat | cytosol | 94.55 | 94.55 |
| HORVU6Hr1G027660.9 | Barley | cytosol | 94.94 | 93.85 |
| Zm00001d015355_P001 | Maize | cytosol | 75.49 | 73.21 |
| OQU84434 | Sorghum | endoplasmic reticulum, vacuole | 80.16 | 71.03 |
| Os02t0168000-02 | Rice | plasma membrane | 77.82 | 68.49 |
| KRH73493 | Soybean | cytosol | 58.75 | 63.45 |
| KRH14650 | Soybean | cytosol, nucleus, peroxisome | 57.98 | 62.6 |
| VIT_06s0009g02490.t01 | Wine grape | cytosol, nucleus, peroxisome | 58.75 | 62.14 |
| CDY01311 | Canola | cytosol | 58.37 | 61.22 |
| AT1G21840.1 | Thale cress | cytosol | 56.81 | 60.83 |
| Bra012296.1-P | Field mustard | cytosol | 57.98 | 60.82 |
| Solyc03g031430.1.1 | Tomato | cytosol | 57.2 | 60.74 |
| PGSC0003DMT400062329 | Potato | cytosol | 56.81 | 60.33 |
| GSMUA_Achr6P21580_001 | Banana | cytosol, plastid | 63.81 | 52.73 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G169600.1 | EnsemblPlantsGene:TraesCS6B01G169600 | Gene3D:1.10.4190.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006807 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016151 | GO:GO:1905182 | InterPro:IPR038277 | InterPro:UreF |
| InterPro:UreF_sf | PANTHER:PTHR33620 | PANTHER:PTHR33620:SF1 | PFAM:PF01730 | PIRSF:PIRSF009467 | MapMan:4.2.1.3.2 |
Description
No Description!
Coordinates
chr6B:+:181698452..181699225
Molecular Weight (calculated)
28343.1 Da
IEP (calculated)
6.150
GRAVY (calculated)
0.047
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDREHSALKK MRLEDAEDSA ISQVPATASS MHQQLFWSQW QLLDSILPTG GFAHSYGLEA AMQSRIVNNQ EDLRLFLIQV LDNIGSLLLP FVYCASRSPE
101: AAAWVKLDQL LDATLTNEVG RKASTSQGSA LLRVAASVFT EIQPLQDLRR TFLGSMSVSL HHAPIFGLIC GLVGFDSETT QRAYMFVAMR DVISAATRLN
201: LIGPLAASVL QHQVAPDAEK MLQKWKDRDV SEASQTAPLL DALQGCHAYM FSRLFCS
101: AAAWVKLDQL LDATLTNEVG RKASTSQGSA LLRVAASVFT EIQPLQDLRR TFLGSMSVSL HHAPIFGLIC GLVGFDSETT QRAYMFVAMR DVISAATRLN
201: LIGPLAASVL QHQVAPDAEK MLQKWKDRDV SEASQTAPLL DALQGCHAYM FSRLFCS
001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS
Arabidopsis Description
UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.