CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G141300.1	Wheat	cytosol	73.1	82.49
HORVU6Hr1G027660.9	Barley	cytosol	72.76	81.15
TraesCS6D01G130700.1	Wheat	cytosol	71.38	80.54
TraesCS6B01G169600.1	Wheat	cytosol	71.03	80.16
Zm00001d015355_P001	Maize	cytosol	73.1	80.0
Os02t0168000-02	Rice	plasma membrane	71.03	70.55
KRH73493	Soybean	cytosol	52.76	64.29
KRH14650	Soybean	cytosol, nucleus, peroxisome	52.07	63.45
AT1G21840.1	Thale cress	cytosol	51.72	62.5
VIT_06s0009g02490.t01	Wine grape	cytosol, nucleus, peroxisome	51.38	61.32
Bra012296.1-P	Field mustard	cytosol	51.38	60.82
CDY01311	Canola	cytosol	51.38	60.82
PGSC0003DMT400062329	Potato	cytosol	50.34	60.33
Solyc03g031430.1.1	Tomato	cytosol	50.34	60.33
GSMUA_Achr6P21580_001	Banana	cytosol, plastid	57.93	54.02
TraesCS6A01G141400.1	Wheat	cytosol, endoplasmic reticulum, plastid	52.41	53.71

Protein Annotations

Gene3D:1.10.4190.10	MapMan:4.2.1.3.2	EntrezGene:8076108	UniProt:A0A1Z5RL17	GO:GO:0003674	GO:GO:0005488
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016151	GO:GO:1905182	InterPro:IPR038277
HAMAP:MF_01385	EnsemblPlants:OQU84434	ProteinID:OQU84434	ProteinID:OQU84434.1	ProteinID:OQU84436.1	PFAM:PF01730
PANTHER:PTHR33620	PANTHER:PTHR33620:SF1	EnsemblPlantsGene:SORBI_3004G053600	UniParc:UPI000B425420	InterPro:UreF	InterPro:UreF_sf

Description

hypothetical protein

Coordinates

chr4:+:4363605..4365607

Molecular Weight (calculated)

31845.3 Da

IEP (calculated)

5.302

GRAVY (calculated)

0.098

Length

290 amino acids

Sequence
(BLAST)

001: MYSPNSLAQL VPNVLYLLKS LVLEIVPSTL LMLMESDSPV SKKSRLFHTE DCEMEEVPSN AVGVNPSLQW TQWQILDSIL PTGGFAHSYG LEAAMQSRMV
101: NNQDDLKSFV IQVLDNTGSL LLPFVYCASK SPDAAAWIKL DQLLEATLTN EVARKASTSQ GSALLRVAAS VFTESQALQD LRRTFLGSKS VSFHHASIFG
201: LICGLVGFDS ETAQRAYMFV TMRDVFSAAT RLNLIGPLAA SVLQHQVAPD AEGMMQKWRD RDVSEASQTA PLLDVLQGCH AYMFSRLFSS

Best Arabidopsis Sequence Match ( AT1G21840.1 )
(BLAST)

001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS

Arabidopsis Description

UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.