CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012296.1-P	Field mustard	cytosol	97.14	97.14
AT1G21840.1	Thale cress	cytosol	84.08	85.83
Solyc03g031430.1.1	Tomato	cytosol	66.12	66.94
VIT_06s0009g02490.t01	Wine grape	cytosol, nucleus, peroxisome	65.31	65.84
PGSC0003DMT400062329	Potato	cytosol	64.49	65.29
KRH14650	Soybean	cytosol, nucleus, peroxisome	62.45	64.29
KRH73493	Soybean	cytosol	62.45	64.29
HORVU6Hr1G027660.9	Barley	cytosol	62.45	58.85
TraesCS6A01G141300.1	Wheat	cytosol	61.22	58.37
TraesCS6B01G169600.1	Wheat	cytosol	61.22	58.37
TraesCS6D01G130700.1	Wheat	cytosol	60.82	57.98
Zm00001d015355_P001	Maize	cytosol	59.59	55.09
Os02t0168000-02	Rice	plasma membrane	62.04	52.05
OQU84434	Sorghum	endoplasmic reticulum, vacuole	60.82	51.38
GSMUA_Achr6P21580_001	Banana	cytosol, plastid	62.04	48.87
TraesCS6A01G141400.1	Wheat	cytosol, endoplasmic reticulum, plastid	46.94	40.64

Protein Annotations

EnsemblPlants:CDY01311	EnsemblPlantsGene:GSBRNA2T00112260001	Gene3D:1.10.4190.10	GO:A0A078EJL2	GO:GO:0003674	GO:GO:0005488
GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016151	GO:GO:1905182	InterPro:IPR038277
InterPro:UreF	InterPro:UreF_sf	PANTHER:PTHR33620	PANTHER:PTHR33620:SF1	PFAM:PF01730	PIRSF:PIRSF009467
ProteinID:CDY01311	ProteinID:CDY01311.1	SEG:seg	UniParc:UPI0004EDD99D	MapMan:4.2.1.3.2	:

Description

BnaA07g10840DUrease accessory protein F [Source:Projected from Arabidopsis thaliana (AT1G21840) UniProtKB/Swiss-Prot;Acc:Q9XHZ3]

Coordinates

chrLK031926:-:129648..130557

Molecular Weight (calculated)

26585.8 Da

IEP (calculated)

6.146

GRAVY (calculated)

0.153

Length

245 amino acids

Sequence
(BLAST)

001: MAKPIGEDSI SESVASRSSS CSQWSQWQLL DSILPTGGFA HSFGLEAAVQ TRLVSSPTDL ETHIIHVLDN TASLLLPFVY SSLKSPDIET WQRLDLLLDA
101: TLTNQVSSKA SISQGSALFR IAASVFTEIP SLKTIRDASL GSSKELRFHH APIFGLVCGL LGMDAETSQR AYLFVTLRDV VSAATRLNLV GPMGASVMQH
201: RIAVVAETVL DKWKDREASE ACQTSPLLDV VQGCHGYLFS RLFCS

Best Arabidopsis Sequence Match ( AT1G21840.2 )
(BLAST)

001: MEEDERRDIV MSRASSCMQW SQWQLLDSIL PTGGFAHSFG LEAAIQTRLV SSPEDLETHI IHVLDNTASL LLPFVYSALK SPDIETWHKL DGILNATLTN
101: QVSSKASMSQ GSALFRIAAS VFTEVPNLKM IRDASLGSKN VCFHHAPIFG LVCGLLGMDS ETSQRAYLFV TLRDVLSAAT RLNIVGPMGA SVMQHRIAIV
201: TETVLEKWMN REAGEACQTS PLLDVVQGCH GYLFSRLFCS

Arabidopsis Description

UREFUrease accessory protein F [Source:UniProtKB/Swiss-Prot;Acc:Q9XHZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.