Factsheet for Os01t0622600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23650.1	Os01t0267900-01	AT2G41090.1	17360592
AT4G23650.1	Os01t0279300-01	AT2G41090.1	17360592
AT4G23650.1	Os01t0810300-01	AT2G41090.1	17360592
AT4G23650.1	Os03t0319300-01	AT2G41090.1	17360592
AT4G23650.1	Os05t0491000-01	AT2G41090.1	17360592
AT4G23650.1	Os05t0491100-01	AT2G41090.1	17360592
AT4G23650.1	Os07t0687200-02	AT2G41090.1	17360592
AT4G23650.1	Os12t0603800-00	AT2G41090.1	17360592
AT4G23650.1	Os01t0267900-01	AT2G41100.1	17360592
AT4G23650.1	Os01t0279300-01	AT2G41100.1	17360592
AT4G23650.1	Os01t0810300-01	AT2G41100.1	17360592
AT4G23650.1	Os03t0319300-01	AT2G41100.1	17360592
AT4G23650.1	Os05t0491000-01	AT2G41100.1	17360592
AT4G23650.1	Os05t0491100-01	AT2G41100.1	17360592
AT4G23650.1	Os07t0687200-02	AT2G41100.1	17360592
AT4G23650.1	Os12t0603800-00	AT2G41100.1	17360592
AT4G23650.1	Os03t0743500-02	AT4G14640.1	17360592
AT4G23650.1	Os01t0267900-01	AT5G21274.1	17360592
AT4G23650.1	Os01t0279300-01	AT5G21274.1	17360592
AT4G23650.1	Os01t0810300-01	AT5G21274.1	17360592
AT4G23650.1	Os03t0319300-01	AT5G21274.1	17360592
AT4G23650.1	Os05t0491000-01	AT5G21274.1	17360592
AT4G23650.1	Os05t0491100-01	AT5G21274.1	17360592
AT4G23650.1	Os07t0687200-02	AT5G21274.1	17360592
AT4G23650.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	89.96	89.96
TraesCS3B01G254500.1	Wheat	golgi, unclear	89.96	89.96
TraesCS3A01G224900.1	Wheat	cytosol, mitochondrion	89.96	89.96
Zm00001d044185_P005	Maize	cytosol, mitochondrion	90.35	89.31
EES01094	Sorghum	cytosol, mitochondrion	90.35	89.14
Zm00001d011392_P001	Maize	cytosol, plastid	90.73	88.68
Os05t0585500-01	Rice	plasma membrane	86.68	82.84
GSMUA_Achr6P31900_001	Banana	mitochondrion	67.18	79.82
HORVU3Hr1G055730.3	Barley	plastid	90.35	78.79
CDY10955	Canola	cytosol	57.14	78.72
Bra019282.1-P	Field mustard	cytosol	56.95	78.46
KRH27875	Soybean	nucleus	76.45	78.42
GSMUA_Achr9P05370_001	Banana	cytosol	66.41	77.13
KRH59992	Soybean	endoplasmic reticulum	77.03	77.03
GSMUA_Achr2P06360_001	Banana	plasma membrane	75.29	75.58
VIT_02s0025g00690.t01	Wine grape	cytosol	76.64	75.19
KRH77599	Soybean	nucleus	76.06	74.62
GSMUA_Achr1P05040_001	Banana	cytosol	67.57	73.84
Solyc08g008170.2.1	Tomato	plastid	73.36	73.64
PGSC0003DMT400014939	Potato	plastid	72.59	72.73
AT4G23650.1	Thale cress	plastid	73.75	72.21
Bra013719.1-P	Field mustard	cytosol, plastid	72.97	72.0
CDY44125	Canola	cytosol, plastid	72.78	71.81
CDY54853	Canola	plastid	72.78	71.81
Bra019281.1-P	Field mustard	plastid	73.17	71.24
Bra019284.1-P	Field mustard	plastid	73.17	71.24
Os01t0808400-01	Rice	plasma membrane	64.67	65.05
KRH41261	Soybean	cytosol	53.09	62.93
CDY62741	Canola	endoplasmic reticulum, plasma membrane	73.36	61.79
Os07t0515100-01	Rice	cytosol	63.32	61.54
Os11t0136600-00	Rice	extracellular	63.13	60.44
Os11t0171500-01	Rice	plasma membrane	55.79	56.34
Os04t0584600-02	Rice	mitochondrion	58.88	55.35
Os04t0560600-01	Rice	plasma membrane	56.76	55.16
Os12t0169800-00	Rice	plasma membrane	55.02	54.18
Os02t0832000-01	Rice	plasma membrane	56.76	53.95
Os07t0161600-01	Rice	plasma membrane	58.11	52.99
Os03t0788500-01	Rice	cytosol	59.65	51.59
Os03t0789000-00	Rice	cytosol, plasma membrane	57.92	50.93
Os10t0539600-01	Rice	nucleus	48.84	47.38
Os12t0486600-00	Rice	plasma membrane	58.11	39.04

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	EntrezGene:4326638	UniProt:A2ZVI7
EMBL:AK243656	ProteinID:BAD61167.1	ProteinID:BAS73225.1	ProteinID:EAZ12734.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0046872	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
EnsemblPlantsGene:Os01g0622600	EnsemblPlants:Os01t0622600-01	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF182	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000009CDFF	RefSeq:XP_015650814.1	SEG:seg	:	:	:

Description

CALCIUM-DEPENDENT PROTEIN KINASE 1Similar to calcium-dependent protein kinase, isoform 2. (Os01t0622600-01)

Coordinates

chr1:+:24839124..24843459

Molecular Weight (calculated)

58743.0 Da

IEP (calculated)

6.475

GRAVY (calculated)

-0.563

Length

518 amino acids

Sequence
(BLAST)

001: MGNRTSRHHR AAPEQPPPQP KPKPQPQQQQ QQWPRPQQPT PPPAAAPDAA MGRVLGRPME DVRATYTFGR ELGRGQFGVT YLVTHKATGK RFACKSIATR
101: KLAHRDDIED VRREVQIMHH LTGHRNIVEL RGAYEDRHSV NLIMELCEGG ELFDRIIARG HYSERAAAAL CREIVAVVHS CHSMGVFHRD LKPENFLFLS
201: KSEDSPLKAT DFGLSVFFKP GEHFKDLVGS AYYVAPEVLK RNYGAEADIW SAGVILYILL SGVPPFWAES EDGIFDAVLR GHIDFSSEPW PSISNGAKDL
301: VKKMLRQDPK ERLTSAEILN HPWIREDGEA PDKPLDITVI SRMKQFRAMN KLKKVALKVV AENLSDEEIT GLKEMFRSLD TDNSGTITLE ELRSGLPKLG
401: TKISESEIRQ LMEAADVDGN GTIDYAEFIS ATMHMNRLEK EDHILKAFEY FDKDHSGYIT VDELEEALKK YDMGDDKTIK EIIAEVDTDH DGRINYQEFV
501: AMMRNNNPEI APNRRRMF

Best Arabidopsis Sequence Match ( AT4G23650.1 )
(BLAST)

001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM

Arabidopsis Description

CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.