Factsheet for PGSC0003DMT400014939

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23650.1	PGSC0003DMT400014123	AT2G41090.1	17360592
AT4G23650.1	PGSC0003DMT400018569	AT2G41090.1	17360592
AT4G23650.1	PGSC0003DMT400046278	AT2G41090.1	17360592
AT4G23650.1	PGSC0003DMT400054299	AT2G41090.1	17360592
AT4G23650.1	PGSC0003DMT400058435	AT2G41090.1	17360592
AT4G23650.1	PGSC0003DMT400070437	AT2G41090.1	17360592
AT4G23650.1	PGSC0003DMT400097662	AT2G41090.1	17360592
AT4G23650.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT4G23650.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT4G23650.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT4G23650.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT4G23650.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT4G23650.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT4G23650.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT4G23650.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT4G23650.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT4G23650.1	PGSC0003DMT400014123	AT5G21274.1	17360592
AT4G23650.1	PGSC0003DMT400018569	AT5G21274.1	17360592
AT4G23650.1	PGSC0003DMT400046278	AT5G21274.1	17360592
AT4G23650.1	PGSC0003DMT400054299	AT5G21274.1	17360592
AT4G23650.1	PGSC0003DMT400058435	AT5G21274.1	17360592
AT4G23650.1	PGSC0003DMT400070437	AT5G21274.1	17360592
AT4G23650.1	PGSC0003DMT400097662	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g008170.2.1	Tomato	plastid	96.91	97.09
KRH27875	Soybean	nucleus	80.27	82.18
KRH59992	Soybean	endoplasmic reticulum	81.43	81.27
VIT_02s0025g00690.t01	Wine grape	cytosol	81.24	79.55
CDY10955	Canola	cytosol	57.25	78.72
KRH77599	Soybean	nucleus	79.88	78.22
Bra019282.1-P	Field mustard	cytosol	56.87	78.19
GSMUA_Achr6P31900_001	Banana	mitochondrion	65.76	77.98
TraesCS1B01G456700.1	Wheat	cytosol	68.09	76.52
TraesCS1A01G424200.1	Wheat	cytosol	67.89	76.3
TraesCS1D01G433400.1	Wheat	cytosol, golgi	67.89	76.3
HORVU1Hr1G092710.1	Barley	cytosol, plasma membrane	69.63	75.0
GSMUA_Achr9P05370_001	Banana	cytosol	63.64	73.77
Os01t0622600-01	Rice	plasma membrane	72.73	72.59
GSMUA_Achr2P06360_001	Banana	plasma membrane	71.57	71.71
TraesCS3A01G224900.1	Wheat	cytosol, mitochondrion	71.57	71.43
TraesCS3B01G254500.1	Wheat	golgi, unclear	71.57	71.43
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	71.57	71.43
Zm00001d044185_P005	Maize	cytosol, mitochondrion	72.34	71.37
EES01094	Sorghum	cytosol, mitochondrion	72.34	71.24
Zm00001d011392_P001	Maize	cytosol, plastid	72.92	71.13
AT4G23650.1	Thale cress	plastid	72.34	70.7
GSMUA_Achr1P05040_001	Banana	cytosol	64.8	70.68
Zm00001d009708_P001	Maize	mitochondrion	73.5	70.5
Bra013719.1-P	Field mustard	cytosol, plastid	71.57	70.48
EES20022	Sorghum	cytosol, mitochondrion	73.69	70.43
CDY54853	Canola	plastid	71.37	70.29
CDY44125	Canola	cytosol, plastid	71.37	70.29
Bra019281.1-P	Field mustard	plastid	71.57	69.55
Bra019284.1-P	Field mustard	plastid	71.57	69.55
Os05t0585500-01	Rice	plasma membrane	72.34	69.0
KRH41261	Soybean	cytosol	57.25	67.73
PGSC0003DMT400024436	Potato	cytosol	67.12	66.22
PGSC0003DMT400011823	Potato	cytosol	66.92	64.67
PGSC0003DMT400057484	Potato	cytosol	63.64	63.15
HORVU3Hr1G055730.3	Barley	plastid	71.57	62.29
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	61.12	62.08
CDY62741	Canola	endoplasmic reticulum, plasma membrane	71.95	60.49
PGSC0003DMT400067082	Potato	cytosol, plastid	56.29	58.08
PGSC0003DMT400060262	Potato	cytosol	55.71	57.26
PGSC0003DMT400025581	Potato	cytosol	59.57	57.04
PGSC0003DMT400002331	Potato	cytosol	54.74	56.04
PGSC0003DMT400043320	Potato	cytosol, plastid	59.19	53.97
PGSC0003DMT400002592	Potato	plastid	59.57	53.29
PGSC0003DMT400018575	Potato	cytosol	55.51	52.76
PGSC0003DMT400065419	Potato	plastid	58.03	51.64
PGSC0003DMT400054991	Potato	cytosol	56.67	50.34
PGSC0003DMT400054983	Potato	cytosol	56.87	49.16
PGSC0003DMT400072554	Potato	cytosol	56.87	48.43
PGSC0003DMT400072292	Potato	cytosol, plastid	55.71	45.14

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102590009	MapMan:18.4.5.4	Gene3D:3.30.200.20	ncoils:Coil
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M1A551	PFAM:PF00069	PFAM:PF13499
EnsemblPlantsGene:PGSC0003DMG400005829	PGSC:PGSC0003DMG400005829	EnsemblPlants:PGSC0003DMT400014939	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF182	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295BC70
RefSeq:XP_006352261.1	SEG:seg	:	:	:	:

Description

Calcium-dependent protein kinase CDPK5 [Source:PGSC_GENE;Acc:PGSC0003DMG400005829]

Coordinates

chr8:-:4970314..4975245

Molecular Weight (calculated)

57851.0 Da

IEP (calculated)

6.106

GRAVY (calculated)

-0.417

Length

517 amino acids

Sequence
(BLAST)

001: MGNCNSLSSD HPPPPAAAAG GGGGATSAPS TTGIRIIPSS QTPPPRPFSG IGRVLGRPME DVRSIYIFGG ELGRGQFGVT YLVTNKKTRQ QFACKSIATR
101: KLINKDDVDD VRREVQIMHH LTGHRNIVEL KGTFEDKHHV HLVMELCAGG ELFDRIIAKG HYSERAAAGV CRQMVTVVHN CHSMGVMHRD LKPENFLFLS
201: SDETSPLKAT DFGLSVFFKP GDVFKDLVGS AYYVAPEVLR REYGPEADIW SAGVILYILL SGVPPFYGEN DQSIFDAVLR GHLDFSSDPW PSVSSSAKDL
301: VKKMLRSDPR ERISAAEVLN HPWMREDGDA SDKPLDIAVL SRMKQFRAMN KLKKVALKVI AENLSEEEII GLKEMFKSID TDDSGTITFE ELKAGLTKMG
401: TKLSESEVRQ LMEAADVDGN GTIDYLEFIT ATMHLNRMER EDHLYKAFEY FDKDKSGYIT MEELEHALKE YNITDEKTIK EIIAEVDTDN DGRINYDEFA
501: TMMRKGNPDF VNNRRRR

Best Arabidopsis Sequence Match ( AT4G23650.1 )
(BLAST)

001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM

Arabidopsis Description

CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.