Factsheet for PGSC0003DMT400002592

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400021864
PGSC0003DMT400051388
PGSC0003DMT400074359

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10660.1	PGSC0003DMT400021864	AT5G24030.1	24280384
AT3G10660.1	PGSC0003DMT400051388	AT5G24030.1	24280384
AT3G10660.1	PGSC0003DMT400074359	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g006370.1.1	Tomato	plastid	98.62	98.62
PGSC0003DMT400065419	Potato	plastid	86.68	86.23
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	84.08	85.41
KRG90147	Soybean	cytosol, plastid	82.53	82.38
KRH33395	Soybean	endoplasmic reticulum, nucleus	82.18	81.76
CDX70192	Canola	cytosol, plastid	78.89	79.72
CDX98791	Canola	cytosol, plastid	78.72	79.41
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	68.86	79.13
CDX80925	Canola	cytosol	77.85	78.53
Bra009420.1-P	Field mustard	cytosol, plastid	79.93	78.17
CDY11313	Canola	cytosol	79.24	77.89
AT5G04870.1	Thale cress	cytosol, plastid	81.14	76.89
CDY08584	Canola	cytosol	76.3	76.56
Bra005824.1-P	Field mustard	cytosol, plastid	80.1	76.4
GSMUA_AchrUn_...	Banana	cytosol	74.22	76.33
CDY00963	Canola	plastid	75.09	75.61
CDY00688	Canola	plastid	76.82	74.0
Os03t0788500-01	Rice	cytosol	76.64	73.96
CDX73914	Canola	plastid	76.47	73.79
Zm00001d034372_P001	Maize	cytosol	75.78	71.57
EER93328	Sorghum	cytosol	76.3	71.47
TraesCS5D01G434500.2	Wheat	cytosol	75.95	70.35
PGSC0003DMT400054983	Potato	cytosol	72.66	70.23
PGSC0003DMT400018575	Potato	cytosol	66.09	70.22
TraesCS5A01G426500.1	Wheat	cytosol	75.78	69.86
TraesCS5B01G428400.2	Wheat	cytosol	75.61	69.7
AT3G10660.1	Thale cress	cytosol, plastid	77.34	69.19
Zm00001d013109_P002	Maize	plasma membrane	73.7	68.71
Zm00001d040996_P003	Maize	plastid	71.8	68.14
KXG23457	Sorghum	plastid	71.97	67.53
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	75.09	67.39
PGSC0003DMT400054991	Potato	cytosol	67.82	67.35
PGSC0003DMT400072554	Potato	cytosol	70.07	66.72
PGSC0003DMT400067082	Potato	cytosol, plastid	57.27	66.07
TraesCS5B01G109300.1	Wheat	plastid	70.76	65.54
TraesCS5D01G124000.1	Wheat	plastid	70.59	65.38
PGSC0003DMT400002331	Potato	cytosol	57.09	65.35
PGSC0003DMT400060262	Potato	cytosol	55.88	64.21
PGSC0003DMT400043320	Potato	cytosol, plastid	62.46	63.67
GSMUA_Achr7P01360_001	Banana	cytosol	72.84	62.74
PGSC0003DMT400072292	Potato	cytosol, plastid	67.3	60.97
PGSC0003DMT400014939	Potato	plastid	53.29	59.57
HORVU5Hr1G030810.1	Barley	cytosol	70.59	59.22
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	52.08	59.14
PGSC0003DMT400024436	Potato	cytosol	51.38	56.68
PGSC0003DMT400011823	Potato	cytosol	52.42	56.64
PGSC0003DMT400057484	Potato	cytosol	50.87	56.43
PGSC0003DMT400025581	Potato	cytosol	49.31	52.78
Os12t0486600-00	Rice	plasma membrane	68.51	51.36
Bra029859.1-P	Field mustard	plastid	76.64	46.63
Bra001373.1-P	Field mustard	plastid	77.85	46.39
CDY00964	Canola	plastid	0.52	0.9
CDY00689	Canola	plastid	0.35	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	EMBL:AB051808	ProteinID:BAB63463
ProteinID:BAB63463.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M0ZKC1
PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400000994	PGSC:PGSC0003DMG400000994	EnsemblPlants:PGSC0003DMT400002592	ScanProsite:PS00018
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF161
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296C827	SEG:seg	:	:	:

Description

Calcium-dependent protein kinase 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400000994]

Coordinates

chr11:-:6258146..6264513

Molecular Weight (calculated)

64805.3 Da

IEP (calculated)

5.211

GRAVY (calculated)

-0.447

Length

578 amino acids

Sequence
(BLAST)

001: MGNTCVGPSI SKNGIFQSMS AAMWRSRSPD DSASTVNNDE SVRVETPTSA KETESPLPVQ DKPPEQMTMP KLEEKEEEKP KKPKKPAEMK RVSSAGLRTD
101: SVLQKKTGNL KEFFSIGKKL GQGQFGTTFL CTEKATGKRY ACKSIAKRKL LTDDDVEDVR REVQIMHHLA GHPHVISIKG AYEDAVAVHL VMEYCAGGEL
201: FDRIIQRGHY TERKAAELTR TIVGVVEACH SLGVMHRDLK PENFLFVDQT EESLLKTIDF GLSIFFKPGD KFTDVVGSPY YVAPEVLRKR YGPEADVWSA
301: GVIIYILLSG VPPFWAENEQ GIFEQVLHGD LDFTSDPWPS ISEDAKDLMR RMLIRDPRKR LTAHEVLCHP WVQVDGVAPD KPLDSAVLSR MKQFSAMNKL
401: KKMALRVIAE SLSEEEIAGL KEMFRMIDTD NSGQITFEEL KDGLKRFGSN LKESEIYDLM QAADVDNSGT IDYGEFIAAT LHLNKIERDD HLFAAFSYFD
501: KDGSGYITAD ELQHACEEFG IGDVRMEEMI READQDNDGR IDYNEFVAMM QKGNPVLGGG KKGLEQSFSI GFREALKL

Best Arabidopsis Sequence Match ( AT5G04870.1 )
(BLAST)

001: MGNTCVGPSR NGFLQSVSAA MWRPRDGDDS ASMSNGDIAS EAVSGELRSR LSDEVQNKPP EQVTMPKPGT DVETKDREIR TESKPETLEE ISLESKPETK
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL

Arabidopsis Description

CPK1CPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQJ5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.