Factsheet for Bra001373.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009724.1-P
Bra026471.1-P
Bra029390.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10660.1	Bra009724.1-P	AT5G24030.1	24280384
AT3G10660.1	Bra026471.1-P	AT5G24030.1	24280384
AT3G10660.1	Bra029390.1-P	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73914	Canola	plastid	61.55	99.67
Bra029859.1-P	Field mustard	plastid	87.42	89.26
AT3G10660.1	Thale cress	cytosol, plastid	56.7	85.14
Bra009420.1-P	Field mustard	cytosol, plastid	51.24	84.09
Bra005824.1-P	Field mustard	cytosol, plastid	51.44	82.34
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	47.42	80.84
Solyc04g009800.2.1	Tomato	cytosol, plastid	47.01	78.49
KRG90147	Soybean	cytosol, plastid	46.8	78.41
PGSC0003DMT400065419	Potato	plastid	46.8	78.14
PGSC0003DMT400002592	Potato	plastid	46.39	77.85
Solyc11g006370.1.1	Tomato	plastid	46.39	77.85
KRH33395	Soybean	endoplasmic reticulum, nucleus	46.6	77.8
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	38.87	74.95
GSMUA_AchrUn_...	Banana	cytosol	42.89	74.02
Os03t0788500-01	Rice	cytosol	43.3	70.12
Bra000105.1-P	Field mustard	cytosol	40.62	69.61
EER93328	Sorghum	cytosol	43.2	67.91
Zm00001d034372_P001	Maize	cytosol	42.58	67.48
Zm00001d040996_P003	Maize	plastid	42.16	67.16
TraesCS5D01G434500.2	Wheat	cytosol	43.09	66.99
TraesCS5A01G426500.1	Wheat	cytosol	42.99	66.51
TraesCS5B01G428400.2	Wheat	cytosol	42.89	66.35
Zm00001d013109_P002	Maize	plasma membrane	42.37	66.29
TraesCS5B01G109300.1	Wheat	plastid	42.58	66.19
TraesCS5D01G124000.1	Wheat	plastid	42.47	66.03
KXG23457	Sorghum	plastid	41.86	65.91
Bra034407.1-P	Field mustard	cytosol	33.2	64.79
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	42.89	64.6
Bra009653.1-P	Field mustard	cytosol	35.77	64.38
Bra029377.1-P	Field mustard	cytosol	27.94	63.62
Bra019282.1-P	Field mustard	cytosol	24.54	63.3
Bra037277.1-P	Field mustard	cytosol	35.88	63.16
Bra029376.1-P	Field mustard	cytosol	29.9	62.77
HORVU5Hr1G030810.1	Barley	cytosol	44.54	62.7
Bra029378.1-P	Field mustard	cytosol	31.24	62.6
GSMUA_Achr7P01360_001	Banana	cytosol	42.99	62.15
Bra020035.1-P	Field mustard	cytosol	31.55	59.19
Bra002231.1-P	Field mustard	cytosol	31.44	58.99
Bra008910.1-P	Field mustard	cytosol	31.34	58.24
Bra006142.1-P	Field mustard	cytosol	31.13	57.74
Bra023367.1-P	Field mustard	cytosol	29.9	56.53
Bra018504.1-P	Field mustard	cytosol	30.21	56.35
Bra013719.1-P	Field mustard	cytosol, plastid	30.41	56.19
Bra019281.1-P	Field mustard	plastid	30.1	54.89
Bra019284.1-P	Field mustard	plastid	30.1	54.89
Bra015796.1-P	Field mustard	cytosol, plastid	29.79	54.84
Bra017283.1-P	Field mustard	cytosol	28.76	54.17
Bra001789.1-P	Field mustard	cytosol	30.21	54.06
Bra029513.1-P	Field mustard	cytosol	25.36	51.14
Os12t0486600-00	Rice	plasma membrane	40.1	50.45
Bra013575.1-P	Field mustard	cytosol	29.59	50.09
Bra021305.1-P	Field mustard	cytosol	25.88	47.72
Bra033557.1-P	Field mustard	endoplasmic reticulum	35.57	38.55
Bra009697.1-P	Field mustard	cytosol	35.26	37.17

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	Gene3D:3.40.50.300	MapMan:7.11.1.1.1.2
InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra001373	EnsemblPlants:Bra001373.1	EnsemblPlants:Bra001373.1-P
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FeS-cluster_ATPase_SufC	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:IPR003439	InterPro:Kinase-like_dom_sf	UniProt:M4CAZ4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS00211	PFscan:PS50011
PFscan:PS50222	PFscan:PS50893	PANTHER:PTHR24349	PANTHER:PTHR24349:SF161	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SMART:SM00382	SUPFAM:SSF47473	SUPFAM:SSF52540	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR01978	UniParc:UPI000254069E	SEG:seg	:	:

Description

AT3G10660 (E=5e-276) CPK2, ATCPK2 | CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase/ protein serine/threonine kinase

Coordinates

chrA03:-:16049119..16054347

Molecular Weight (calculated)

107234.0 Da

IEP (calculated)

6.101

GRAVY (calculated)

-0.331

Length

970 amino acids

Sequence
(BLAST)

001: MAGANLHLRH SLSTAQFLPT FSSSSPPPPR RVQLRTSPSR VLFSNLRANS PTSRTTTRRS NTITSSSLSS AVDSDSLVGD GGEARKIPLL EVKDLRAVIV
101: ESRQEILKGV NLVVYEGEVH AVMGKNGSGK STFSKVLVGH PDYEVTGGSI VFKGKNLVDM EPEERSLAGL FMSFQSPVAI PGVSNMDFLN MAFNARKRKL
201: GQPELDPIQF YSHLVSKLEV VNMKTDFLNR NVNEGFSGGE RKRNEILQLA VLGAELAILD EIDSGLDVDA LQDVAKAVNG LLTPTNSVLM ITHYQRLLDY
301: IKPTLIHIME NGRIIKTGDN SLAKLLEKEG YKAISGLEIF LMGNVCVGPT ISGNSFVQAV SAAIWRPRIG AEQQASSHGK GEASKEAASS HGKGEVSKEA
401: ASSHGKAEVS KEASSSEPLP DQVQNKPPEQ VTMSNPRTIP EAETKSIPEE VKQEVVVQVE TTKPETKSET KPETKPDPNK PKHMRRVSSA GLRTESVLQR
501: KTENFKEFYS LGRKLGQGQF GTTFLCVEKG TGKEYACKSI SKRKLLTDED VEDVRREIQI MHHLAGHPNV ISIKGAYEDV VAVHLVMELC SGGELFDRII
601: QRGHYTERKA AELARTIVGV LETCHSLGVM HRDLKPENFL FVSKEEDSLL KTIDFGLSMF FKPDEIFTDV VGSPYYVAPE VLRKRYGSES DVWSAGVIVY
701: ILLSGVPPFW AETEQGIFEQ VLHGDLDFSS DPWPSISEGA KDLVQKMLVR DPKRRLTAHQ VLCHPWVQID GVAPDKPLDS AVLSRMKQFS AMNKFKKMAL
801: RVIAESLSEE EIAGLKEMFK MIDADNSGQI TFEELKVGLK RVGANLKESE ILDLMQAADV DNSGTIDYKE FIAATLHLNK IEREDHLFAA FSYFDKDDSG
901: FITHDELQQA CEEFGVEDAR IEEMIRDVDQ DKDGRIDYNE FVAMMQKGSI MGGGPMKMGL EKSISISLKH

Best Arabidopsis Sequence Match ( AT3G10660.2 )
(BLAST)

001: MGNACVGPNI SGNGFLQTVT AAMWRPRIGA EQASSSSHGN GQVSKEAASE PATDQVQNKP PEPITMPSSK TNPETKLKPD LEIQPEEKKE KVLAEETKQK
101: VVPEESKQEV PPEESKREVV VQPESAKPET KSESKPETTK PETTSETKPE TKAEPQKPKH MRRVSSAGLR TESVLQRKTE NFKEFYSLGR KLGQGQFGTT
201: FLCLEKGTGN EYACKSISKR KLLTDEDVED VRREIQIMHH LAGHPNVISI KGAYEDVVAV HLVMELCSGG ELFDRIIQRG HYTERKAAEL ARTIVGVLEA
301: CHSLGVMHRD LKPENFLFVS REEDSLLKTI DFGLSMFFKP DEVFTDVVGS PYYVAPEVLR KRYGPESDVW SAGVIVYILL SGVPPFWAET EQGIFEQVLH
401: GDLDFSSDPW PSISESAKDL VRKMLVRDPK RRLTAHQVLC HPWVQIDGVA PDKPLDSAVL SRMKQFSAMN KFKKMALRVI AESLSEEEIA GLKQMFKMID
501: ADNSGQITFE ELKAGLKRVG ANLKESEILD LMQAADVDNS GTIDYKEFIA ATLHLNKIER EDHLFAAFSY FDKDESGFIT PDELQQACEE FGVEDARIEE
601: MMRDVDQDKD GRIDYNEFVA MMQKGSIMGG PVKMGLENSI SISLKH

Arabidopsis Description

CPK2Calcium-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38870]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.