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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
YLoc:cytosol
 plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0226600-02
Os01t0385400-01
Os01t0623200-01
Os05t0219900-01
Os07t0181100-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G10660.1 Os01t0226600-02 AT5G24030.1 24280384
AT3G10660.1 Os01t0385400-01 AT5G24030.1 24280384
AT3G10660.1 Os01t0623200-01 AT5G24030.1 24280384
AT3G10660.1 Os05t0219900-01 AT5G24030.1 24280384
AT3G10660.1 Os07t0181100-01 AT5G24030.1 24280384
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G124000.1 Wheat plastid 62.52 77.24
Zm00001d040996_P003 Maize plastid 60.96 77.18
KXG23457 Sorghum plastid 61.61 77.11
TraesCS5B01G109300.1 Wheat plastid 62.39 77.08
Solyc10g081740.1.1 Tomato cytosol 46.82 72.34
VIT_13s0175g00080.t01 Wine grape cytosol, plastid 53.05 71.88
HORVU5Hr1G030810.1 Barley cytosol 62.52 69.96
PGSC0003DMT400065419 Potato plastid 52.01 69.02
Solyc04g009800.2.1 Tomato cytosol, plastid 52.01 69.02
PGSC0003DMT400002592 Potato plastid 51.36 68.51
Solyc11g006370.1.1 Tomato plastid 51.36 68.51
Os03t0788500-01 Rice cytosol 53.05 68.28
CDY00963 Canola plastid 50.45 67.77
KRG90147 Soybean cytosol, plastid 50.84 67.7
CDX70192 Canola cytosol, plastid 50.19 67.66
KRH33395 Soybean endoplasmic reticulum, nucleus 50.84 67.47
Os11t0171500-01 Rice plasma membrane 44.88 67.45
CDX98791 Canola cytosol, plastid 50.06 67.36
CDY08584 Canola cytosol 50.32 67.36
Os07t0161600-01 Rice plasma membrane 49.42 67.08
CDX80925 Canola cytosol 49.68 66.84
VIT_08s0032g01220.t01 Wine grape cytosol 50.19 66.72
Os12t0169800-00 Rice plasma membrane 45.14 66.16
CDY11313 Canola cytosol 50.45 66.16
KRH72128 Soybean plastid 50.19 65.93
Bra009420.1-P Field mustard cytosol, plastid 50.45 65.82
Os03t0789000-00 Rice cytosol, plasma membrane 49.55 64.86
CDY00688 Canola plastid 50.32 64.67
CDX73914 Canola plastid 50.19 64.61
AT5G04870.1 Thale cress cytosol, plastid 50.84 64.26
Bra005824.1-P Field mustard cytosol, plastid 49.94 63.53
Os04t0584600-02 Rice mitochondrion 44.62 62.43
Solyc01g006840.2.1 Tomato cytosol 47.6 61.37
PGSC0003DMT400054983 Potato cytosol 47.6 61.37
PGSC0003DMT400072554 Potato cytosol 47.86 60.79
KRH68038 Soybean cytosol 46.04 60.17
Os02t0832000-01 Rice plasma membrane 42.41 60.0
AT3G10660.1 Thale cress cytosol, plastid 50.06 59.75
KRG96293 Soybean cytosol 45.4 59.02
Os01t0808400-01 Rice plasma membrane 39.04 58.45
Os01t0622600-01 Rice plasma membrane 39.04 58.11
Os07t0515100-01 Rice cytosol 38.39 55.53
Os05t0585500-01 Rice plasma membrane 38.91 55.35
Os11t0136600-00 Rice extracellular 38.0 54.16
Os10t0539600-01 Rice nucleus 36.71 53.0
Os04t0560600-01 Rice plasma membrane 36.32 52.53
Bra029859.1-P Field mustard plastid 50.19 40.74
Bra001373.1-P Field mustard plastid 50.45 40.1
CDY00964 Canola plastid 0.0 0.0
CDY00689 Canola plastid 0.0 0.0
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777GO:GO:0046872
InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os12g0486600EnsemblPlants:Os12t0486600-00PFAM:PF00069
PFAM:PF13405PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF164InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054
SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0003938E95SEG:seg
Description
CALCIUM-DEPENDENT PROTEIN KINASE 27Similar to J013164K19, full insert sequence (Fragment). (Os12t0486600-00)
Coordinates
chr12:+:18098260..18101695
Molecular Weight (calculated)
85471.7 Da
IEP (calculated)
9.749
GRAVY (calculated)
-0.334
Length
771 amino acids
Sequence
(BLAST)
001: GHGHKNVPRN QSTNFPRAVT LTQLSSRAES RHPTAALPLF PAKFGTPPLL PLPLRFSSIS SPFLASPDRL VSTHPSSPAA PSPPPHIIAR FPAERAPFRR
101: RRRRRRRLRR RRAVLCEEKV ILTAAVRRHC RRGRGTAPDG QRLHRPAPQL RQERPPRHPA AAPRRAVLPV AAHHHLPLHP RRAPLRPLLQ AAAAHPDRPA
201: RTRRHLRAAA TAAAARTAAR GAVAAAATAG AALAATARVV EHHPAASAAA AAAASVLRRK TENLKDKYSL GRKLGQGQFG TTYLCVDKAN GGEYACKSIA
301: KRKLLTDEDV EDVRREIQIM HHLAGHPNII SIRGAYEDAV AVHVVMELCA GGELFDRIVR KGHYTERQAA GLARVIVAVV ESCHSLGVMH RDLKPENFLF
401: VGNEEDAPLK TIDFGLSMFF RPGEVFTDVV GSPYYVAPEV LKKSYGQEAD VWSAGVIIYI LLCGVPPFWA ETEQGIFEQV LHGTLDFESD PWPNVSDGAK
501: DLLRKVLVRD PKKRLTAHEV LCHPWLQMSG SAPDKPLDSA VLSRLRQFSA MNKLKKMALR VIAENLSEEE IAGLKEMFKM MDTDNSGQIN YEELKAGLER
601: VGANMKESEI YQLMQAADID NSGTIDYGEF IAATLHLNKV EREDHLYAAF QYFDKDGSGY ITSDELQQAC DEFGIEDVRL EDMIGEVDQD NVRSSKNQSY
701: NFALLLGLAT LTMKDYLPSV NLMCFVLFFF LQDGRIDYNE FVAMMQKTTT GFGKKGGHNF SGFRDALKSH S
Best Arabidopsis Sequence Match ( AT3G10660.2 )
(BLAST)
001: MGNACVGPNI SGNGFLQTVT AAMWRPRIGA EQASSSSHGN GQVSKEAASE PATDQVQNKP PEPITMPSSK TNPETKLKPD LEIQPEEKKE KVLAEETKQK
101: VVPEESKQEV PPEESKREVV VQPESAKPET KSESKPETTK PETTSETKPE TKAEPQKPKH MRRVSSAGLR TESVLQRKTE NFKEFYSLGR KLGQGQFGTT
201: FLCLEKGTGN EYACKSISKR KLLTDEDVED VRREIQIMHH LAGHPNVISI KGAYEDVVAV HLVMELCSGG ELFDRIIQRG HYTERKAAEL ARTIVGVLEA
301: CHSLGVMHRD LKPENFLFVS REEDSLLKTI DFGLSMFFKP DEVFTDVVGS PYYVAPEVLR KRYGPESDVW SAGVIVYILL SGVPPFWAET EQGIFEQVLH
401: GDLDFSSDPW PSISESAKDL VRKMLVRDPK RRLTAHQVLC HPWVQIDGVA PDKPLDSAVL SRMKQFSAMN KFKKMALRVI AESLSEEEIA GLKQMFKMID
501: ADNSGQITFE ELKAGLKRVG ANLKESEILD LMQAADVDNS GTIDYKEFIA ATLHLNKIER EDHLFAAFSY FDKDESGFIT PDELQQACEE FGVEDARIEE
601: MMRDVDQDKD GRIDYNEFVA MMQKGSIMGG PVKMGLENSI SISLKH
Arabidopsis Description
CPK2Calcium-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38870]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.