CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX80404
CDX87147
CDX88065
CDY44267
CDY46973

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10660.1	CDX80404	AT5G24030.1	24280384
AT3G10660.1	CDX87147	AT5G24030.1	24280384
AT3G10660.1	CDX88065	AT5G24030.1	24280384
AT3G10660.1	CDY44267	AT5G24030.1	24280384
AT3G10660.1	CDY46973	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73914	Canola	plastid	93.5	93.66
CDY08584	Canola	cytosol	89.0	92.71
CDY00963	Canola	plastid	86.67	90.59
CDX70192	Canola	cytosol, plastid	80.17	84.09
CDX98791	Canola	cytosol, plastid	80.17	83.94
CDX80925	Canola	cytosol	79.5	83.25
AT3G10660.1	Thale cress	cytosol, plastid	89.17	82.82
CDY11313	Canola	cytosol	80.0	81.63
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	75.0	79.09
Solyc04g009800.2.1	Tomato	cytosol, plastid	74.5	76.94
PGSC0003DMT400002592	Potato	plastid	74.0	76.82
KRG90147	Soybean	cytosol, plastid	74.0	76.68
Solyc11g006370.1.1	Tomato	plastid	73.83	76.64
PGSC0003DMT400065419	Potato	plastid	74.17	76.59
KRH33395	Soybean	endoplasmic reticulum, nucleus	73.5	75.9
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	61.83	73.76
GSMUA_AchrUn_...	Banana	cytosol	67.83	72.42
CDY54794	Canola	cytosol	56.17	70.06
CDY59100	Canola	cytosol	56.17	70.06
CDY47496	Canola	cytosol	55.5	69.52
Os03t0788500-01	Rice	cytosol	68.83	68.95
CDY14419	Canola	cytosol	62.0	67.64
CDY07688	Canola	cytosol	62.0	67.64
EER93328	Sorghum	cytosol	68.33	66.45
Zm00001d034372_P001	Maize	cytosol	67.67	66.34
Zm00001d040996_P003	Maize	plastid	66.83	65.85
TraesCS5D01G434500.2	Wheat	cytosol	68.17	65.54
TraesCS5A01G426500.1	Wheat	cytosol	68.17	65.23
CDX87164	Canola	cytosol	52.67	65.15
TraesCS5B01G428400.2	Wheat	cytosol	68.0	65.07
TraesCS5B01G109300.1	Wheat	plastid	67.67	65.06
CDY16860	Canola	cytosol	52.67	65.02
KXG23457	Sorghum	plastid	66.67	64.94
TraesCS5D01G124000.1	Wheat	plastid	67.5	64.9
Zm00001d013109_P002	Maize	plasma membrane	67.0	64.84
CDY05064	Canola	cytosol	53.83	64.6
CDX90725	Canola	cytosol	53.83	64.6
CDY37101	Canola	cytosol	53.5	64.59
CDX80376	Canola	cytosol	52.83	64.56
CDX73342	Canola	nucleus, plasma membrane	53.33	64.39
CDY40426	Canola	cytosol	43.83	64.15
CDY46963	Canola	cytosol	45.5	64.08
CDY10955	Canola	cytosol	40.0	63.83
CDX69129	Canola	nucleus, plasma membrane	57.67	63.6
CDX87997	Canola	cytosol	57.0	63.45
CDX92440	Canola	cytosol	52.17	63.36
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	68.0	63.35
CDX75493	Canola	cytosol	57.5	63.3
CDY07866	Canola	cytosol	56.83	63.27
CDY40788	Canola	cytosol	51.0	63.22
CDY46964	Canola	cytosol	50.83	63.15
CDY16557	Canola	cytosol	51.17	63.04
CDY26800	Canola	cytosol	57.33	62.77
CDY40790	Canola	cytosol	47.67	61.9
CDY46962	Canola	cytosol	47.67	61.77
CDX72530	Canola	cytosol	51.33	61.6
CDY52603	Canola	cytosol	45.83	61.52
GSMUA_Achr7P01360_001	Banana	cytosol	68.0	60.8
CDY40789	Canola	cytosol	50.83	59.34
HORVU5Hr1G030810.1	Barley	cytosol	67.67	58.93
CDY44912	Canola	cytosol	50.5	58.61
CDX97174	Canola	cytosol	50.83	58.43
CDX69700	Canola	cytosol	50.83	58.43
CDX92536	Canola	cytosol	50.33	58.41
CDY63783	Canola	cytosol	50.17	58.22
CDY13993	Canola	cytosol	50.17	58.22
CDX78468	Canola	cytosol	50.5	57.94
CDX70450	Canola	cytosol	50.33	57.74
CDX91224	Canola	cytosol	41.33	57.14
CDX85697	Canola	cytosol	48.5	56.73
CDX97315	Canola	cytosol, plasma membrane	48.67	56.15
CDY44125	Canola	cytosol, plastid	48.83	55.81
CDX91168	Canola	cytosol	48.5	55.64
CDY54853	Canola	plastid	48.33	55.24
CDY36037	Canola	nucleus, plasma membrane	48.33	54.61
CDX82244	Canola	cytosol	48.33	54.31
CDY32077	Canola	cytosol	46.0	53.28
CDY66815	Canola	cytosol, plastid	48.0	52.17
CDX73219	Canola	cytosol, mitochondrion	47.83	51.99
CDY07254	Canola	cytosol	46.83	51.75
CDY24863	Canola	cytosol	46.67	51.57
CDX82886	Canola	nucleus, plasma membrane	47.5	51.17
CDY43077	Canola	cytosol	44.0	50.57
CDX79112	Canola	cytosol	47.33	50.44
Os12t0486600-00	Rice	plasma membrane	64.67	50.32
CDY62741	Canola	endoplasmic reticulum, plasma membrane	48.33	47.15
CDX88038	Canola	cytosol	52.83	35.07
CDY00964	Canola	plastid	0.17	0.3
CDY00689	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	GO:A0A078EMP5	EnsemblPlants:CDY00688
ProteinID:CDY00688	ProteinID:CDY00688.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00110524001	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF161	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF0D28	SEG:seg

Description

BnaC03g36720D

Coordinates

chrLK031921:-:248491..251015

Molecular Weight (calculated)

66834.6 Da

IEP (calculated)

5.151

GRAVY (calculated)

-0.413

Length

600 amino acids

Sequence
(BLAST)

001: MGNVCVGPTI SGNSLVQAVS AAIWRPRIGA DQQASSHGKG EASKEAASSH GKAEVSKEAS SSEPLPDQVQ NKPPEQQEVV LQVETTKPET TKPDTKSETN
101: PPEKKPDPNK PKHMRRVSSA GLRTESVLQR KTENFKEFYS LGRKLGQGQF GTTFLCLEKG TGKEYACKSI SKRKLLTDED VEDVRREIQI MHHLAGHPNV
201: ISIKGAYEDV VAVHLVMELC SGGELFDRII QRGHYTERKA AELARTIVGV LETCHSLGVM HRDLKPENFL FVSKEEDSLL KTIDFGLSMF FKPDEVFTDV
301: VGSPYYVAPE VLRKRYGSES DVWSAGVIVY ILLSGVPPFW AETEQGIFEQ VLHGDLDFSS DPWPSISEGA KDLVQKMLVR DPKRRLTAHQ VLCHPWVQID
401: GVAPDKPLDS AVLSRMKQFS AMNKFKKMAL RVIAESLSEE EIAGLKEMFK MIDADNSGQI TFEELKVGLK RVGANLEESE ILDLMQAADV DNSGTIDYKE
501: FIAATLHLNK IEREDHLFAA FSYFDKDDSG FITHDELQQA CEEFGVEDAR IEEMICDVDQ DKDGRIDYNE FVAMMQKGSI MGGGPMKMGL EKSISISLKH

Best Arabidopsis Sequence Match ( AT3G10660.2 )
(BLAST)

001: MGNACVGPNI SGNGFLQTVT AAMWRPRIGA EQASSSSHGN GQVSKEAASE PATDQVQNKP PEPITMPSSK TNPETKLKPD LEIQPEEKKE KVLAEETKQK
101: VVPEESKQEV PPEESKREVV VQPESAKPET KSESKPETTK PETTSETKPE TKAEPQKPKH MRRVSSAGLR TESVLQRKTE NFKEFYSLGR KLGQGQFGTT
201: FLCLEKGTGN EYACKSISKR KLLTDEDVED VRREIQIMHH LAGHPNVISI KGAYEDVVAV HLVMELCSGG ELFDRIIQRG HYTERKAAEL ARTIVGVLEA
301: CHSLGVMHRD LKPENFLFVS REEDSLLKTI DFGLSMFFKP DEVFTDVVGS PYYVAPEVLR KRYGPESDVW SAGVIVYILL SGVPPFWAET EQGIFEQVLH
401: GDLDFSSDPW PSISESAKDL VRKMLVRDPK RRLTAHQVLC HPWVQIDGVA PDKPLDSAVL SRMKQFSAMN KFKKMALRVI AESLSEEEIA GLKQMFKMID
501: ADNSGQITFE ELKAGLKRVG ANLKESEILD LMQAADVDNS GTIDYKEFIA ATLHLNKIER EDHLFAAFSY FDKDESGFIT PDELQQACEE FGVEDARIEE
601: MMRDVDQDKD GRIDYNEFVA MMQKGSIMGG PVKMGLENSI SISLKH

Arabidopsis Description

CPK2Calcium-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38870]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.