CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69129	Canola	nucleus, plasma membrane	92.2	84.74
CDY47496	Canola	cytosol	80.8	84.34
CDX75493	Canola	cytosol	91.8	84.22
AT4G35310.1	Thale cress	cytosol	91.6	82.37
CDX87997	Canola	cytosol	87.4	81.08
CDY07866	Canola	cytosol	87.2	80.89
CDY26800	Canola	cytosol	88.2	80.47
CDY52603	Canola	cytosol	69.4	77.63
CDY54794	Canola	cytosol	74.4	77.34
CDY59100	Canola	cytosol	74.4	77.34
KRH74107	Soybean	cytosol	82.6	75.23
Solyc01g112250.2.1	Tomato	cytosol	80.2	75.09
GSMUA_Achr2P11030_001	Banana	cytosol	75.2	74.75
KRH14008	Soybean	cytosol	82.6	74.01
Solyc10g074570.1.1	Tomato	cytosol, plastid	82.2	73.79
GSMUA_Achr4P29450_001	Banana	cytosol	78.6	72.51
PGSC0003DMT400043320	Potato	cytosol, plastid	82.2	72.49
Zm00001d002540_P002	Maize	cytosol, mitochondrion	77.0	70.38
EES11322	Sorghum	mitochondrion	77.4	69.73
TraesCS6B01G288600.1	Wheat	mitochondrion	76.2	69.53
TraesCS6D01G242000.2	Wheat	mitochondrion	76.2	69.53
Os04t0584600-02	Rice	mitochondrion	76.6	69.51
TraesCS2D01G456400.1	Wheat	cytosol, mitochondrion	77.2	69.42
TraesCS6A01G261200.1	Wheat	mitochondrion	76.2	69.27
Zm00001d026018_P001	Maize	mitochondrion	77.0	69.24
TraesCS2B01G478100.1	Wheat	cytosol, mitochondrion	77.4	69.23
TraesCS2A01G456100.1	Wheat	plastid	77.2	69.18
Zm00001d051502_P004	Maize	mitochondrion	76.8	68.33
OQU85618	Sorghum	mitochondrion	76.4	67.61
OQU86029	Sorghum	cytosol	66.8	66.27
GSMUA_Achr1P02840_001	Banana	cytosol, plastid	78.6	62.28
Os02t0832000-01	Rice	plasma membrane	67.2	61.65
HORVU6Hr1G066470.15	Barley	cytosol	69.8	61.44
CDY10955	Canola	cytosol	45.8	60.9
TraesCS6A01G421000.1	Wheat	cytosol	67.8	60.43
TraesCS6D01G404800.1	Wheat	cytosol	67.8	60.43
TraesCS6B01G467300.1	Wheat	cytosol	67.4	59.33
HORVU6Hr1G094990.2	Barley	cytosol, plastid	67.2	59.15
CDX90725	Canola	cytosol	59.0	59.0
CDY05064	Canola	cytosol	59.0	59.0
CDX73342	Canola	nucleus, plasma membrane	58.6	58.95
CDY37101	Canola	cytosol	58.6	58.95
CDX87164	Canola	cytosol	56.2	57.94
CDY16860	Canola	cytosol	56.0	57.61
CDX80376	Canola	cytosol	56.4	57.43
CDX92440	Canola	cytosol	56.0	56.68
CDY16557	Canola	cytosol	55.0	56.47
CDY46964	Canola	cytosol	54.2	56.11
CDY46963	Canola	cytosol	47.6	55.87
CDY40788	Canola	cytosol	54.0	55.79
CDY46962	Canola	cytosol	51.2	55.29
CDY40790	Canola	cytosol	51.0	55.19
CDX70192	Canola	cytosol, plastid	62.8	54.9
CDX98791	Canola	cytosol, plastid	62.6	54.62
CDX80925	Canola	cytosol	62.0	54.1
CDY00963	Canola	plastid	62.0	54.01
CDY40789	Canola	cytosol	55.2	53.7
CDY08584	Canola	cytosol	61.8	53.65
CDY11313	Canola	cytosol	62.4	53.06
CDY63783	Canola	cytosol	54.0	52.22
CDY14419	Canola	cytosol	57.0	51.82
CDY07688	Canola	cytosol	57.0	51.82
CDX92536	Canola	cytosol	53.4	51.64
CDY44912	Canola	cytosol	53.4	51.64
CDY13993	Canola	cytosol	53.2	51.45
CDX73914	Canola	plastid	61.6	51.42
CDY00688	Canola	plastid	61.6	51.33
CDX69700	Canola	cytosol	53.4	51.15
CDX97174	Canola	cytosol	53.4	51.15
CDX70450	Canola	cytosol	53.0	50.67
CDX78468	Canola	cytosol	52.8	50.48
CDY40426	Canola	cytosol	41.2	50.24
CDX97315	Canola	cytosol, plasma membrane	52.0	50.0
CDY44125	Canola	cytosol, plastid	52.0	49.52
CDX85697	Canola	cytosol	50.6	49.32
CDX91224	Canola	cytosol	42.8	49.31
CDY54853	Canola	plastid	51.6	49.14
CDX91168	Canola	cytosol	50.8	48.57
CDY36037	Canola	nucleus, plasma membrane	51.2	48.21
CDX82244	Canola	cytosol	51.2	47.94
CDX82886	Canola	nucleus, plasma membrane	51.0	45.78
CDY66815	Canola	cytosol, plastid	50.4	45.65
CDY07254	Canola	cytosol	49.4	45.49
CDX73219	Canola	cytosol, mitochondrion	50.2	45.47
CDY24863	Canola	cytosol	49.2	45.3
CDX79112	Canola	cytosol	50.8	45.12
CDY43077	Canola	cytosol	45.8	43.87
CDY62741	Canola	endoplasmic reticulum, plasma membrane	52.2	42.44
CDY32077	Canola	cytosol	43.0	41.51
CDX88038	Canola	cytosol	56.4	31.19
CDY00964	Canola	plastid	0.6	0.9
CDY00689	Canola	plastid	0.4	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	GO:A0A078C6Y9	EnsemblPlants:CDX72530	ProteinID:CDX72530
ProteinID:CDX72530.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00100066001	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF4C39	SEG:seg	:

Description

BnaC07g45520D

Coordinates

chrLK031796:+:1729828..1732227

Molecular Weight (calculated)

56050.5 Da

IEP (calculated)

5.203

GRAVY (calculated)

-0.411

Length

500 amino acids

Sequence
(BLAST)

001: MGNSCRGSFK DKLFQTNNST KLEDNSKTST NVTSNRSSST NTEEFSSPKK DSKNSPLVIP SKEPIMRRNM DNQAYYVLGH KTPNIRDLYT LSRKLGQGQF
101: GTTYLCTELA TGVDYACKSI SKRKLISKED VEDRGHYSER KAAELTKIIV GVVEACHSLG VMHRDLKPEN FLLVNKDDDF SLKAIDFGLS VFFKPGQIFT
201: DVVGSPYYVA PEVLLKRYGP EADVWTAGVI LYILLSGVPP FWAETQQGIF DAVLKGYIDF DSDPWPVISD SAKDLIRRML SSKPAERLTA HEVLRHPWIC
301: ENGVAPDRPL DPAVLSRLKQ FSAMNKLKKM ALKVIAESLS EEEIAGLREM FQAMDTDNSG AITFDELKAG LRKYGSTLKD TEIHDLMEAA DVDNSGTIDY
401: SEFIAATIHL NKLEREEHLV AAFQYFDKDG SGYITIDELQ QACVEHSMTD VFLEDIIKEV DKNNDGQIDY GEFVEMMQKG NAGVGRRTMR NSLNISMRDA

Best Arabidopsis Sequence Match ( AT2G17290.1 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.