Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G38910.1 | CDX80404 | AT5G24030.1 | 24280384 |
| AT2G38910.1 | CDX87147 | AT5G24030.1 | 24280384 |
| AT2G38910.1 | CDX88065 | AT5G24030.1 | 24280384 |
| AT2G38910.1 | CDY44267 | AT5G24030.1 | 24280384 |
| AT2G38910.1 | CDY46973 | AT5G24030.1 | 24280384 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07688 | Canola | cytosol | 99.82 | 99.82 |
| Bra000105.1-P | Field mustard | cytosol | 99.64 | 96.82 |
| AT2G38910.1 | Thale cress | cytosol, plastid | 92.18 | 86.96 |
| VIT_08s0032g00780.t01 | Wine grape | cytosol | 76.55 | 74.12 |
| Solyc10g076900.1.1 | Tomato | cytosol | 65.64 | 72.06 |
| PGSC0003DMT400018575 | Potato | cytosol | 70.18 | 70.96 |
| KRH32931 | Soybean | plastid | 76.73 | 70.92 |
| PGSC0003DMT400054991 | Potato | cytosol | 74.36 | 70.27 |
| GSMUA_Achr9P25890_001 | Banana | plastid | 60.91 | 70.08 |
| Solyc01g006730.2.1 | Tomato | cytosol | 74.0 | 69.93 |
| CDX70192 | Canola | cytosol, plastid | 70.73 | 68.01 |
| Solyc10g081640.1.1 | Tomato | cytosol | 71.45 | 67.88 |
| CDX80925 | Canola | cytosol | 70.55 | 67.71 |
| CDX98791 | Canola | cytosol, plastid | 70.55 | 67.71 |
| CDY11313 | Canola | cytosol | 70.91 | 66.33 |
| Zm00001d034376_P001 | Maize | plastid | 69.27 | 65.69 |
| TraesCS2D01G249900.2 | Wheat | cytosol, plastid | 66.36 | 64.95 |
| CDY08584 | Canola | cytosol | 68.0 | 64.93 |
| CDY47496 | Canola | cytosol | 56.55 | 64.93 |
| CDY54794 | Canola | cytosol | 56.55 | 64.66 |
| CDY59100 | Canola | cytosol | 56.55 | 64.66 |
| CDY00963 | Canola | plastid | 67.45 | 64.63 |
| EER90764 | Sorghum | plastid | 68.73 | 64.62 |
| Os07t0161600-01 | Rice | plasma membrane | 66.73 | 64.61 |
| HORVU2Hr1G058530.2 | Barley | cytosol, plastid | 66.36 | 64.6 |
| TraesCS2A01G248200.3 | Wheat | cytosol, plastid | 66.36 | 64.49 |
| TraesCS2B01G269200.3 | Wheat | cytosol, plastid | 66.36 | 64.49 |
| Zm00001d013105_P004 | Maize | cytosol, plastid | 68.18 | 64.21 |
| EER98014 | Sorghum | cytosol, plastid | 67.09 | 63.51 |
| TraesCS5B01G428700.1 | Wheat | cytosol | 67.45 | 63.31 |
| CDX73914 | Canola | plastid | 68.36 | 62.77 |
| Zm00001d007912_P009 | Maize | cytosol, plastid | 67.45 | 62.14 |
| PGSC0003DMT400072292 | Potato | cytosol, plastid | 72.0 | 62.07 |
| CDY00688 | Canola | plastid | 67.64 | 62.0 |
| CDY16860 | Canola | cytosol | 54.55 | 61.73 |
| CDX87164 | Canola | cytosol | 54.0 | 61.24 |
| TraesCS5A01G426800.2 | Wheat | cytosol | 67.64 | 60.98 |
| TraesCS5D01G434800.2 | Wheat | cytosol | 67.45 | 60.82 |
| CDY05064 | Canola | cytosol | 55.09 | 60.6 |
| CDX90725 | Canola | cytosol | 55.09 | 60.6 |
| CDY37101 | Canola | cytosol | 54.36 | 60.16 |
| CDX73342 | Canola | nucleus, plasma membrane | 54.36 | 60.16 |
| Os03t0789000-00 | Rice | cytosol, plasma membrane | 64.36 | 60.1 |
| CDY40426 | Canola | cytosol | 44.36 | 59.51 |
| CDX80376 | Canola | cytosol | 53.09 | 59.47 |
| CDY07866 | Canola | cytosol | 58.18 | 59.37 |
| CDX87997 | Canola | cytosol | 58.18 | 59.37 |
| CDY10955 | Canola | cytosol | 40.36 | 59.04 |
| CDY26800 | Canola | cytosol | 58.73 | 58.94 |
| CDY46964 | Canola | cytosol | 51.64 | 58.8 |
| CDX69129 | Canola | nucleus, plasma membrane | 58.0 | 58.64 |
| CDX75493 | Canola | cytosol | 58.0 | 58.53 |
| CDX92440 | Canola | cytosol | 52.36 | 58.3 |
| CDY52603 | Canola | cytosol | 47.27 | 58.17 |
| CDY40788 | Canola | cytosol | 51.09 | 58.06 |
| CDY46963 | Canola | cytosol | 44.91 | 57.98 |
| CDY40790 | Canola | cytosol | 48.55 | 57.79 |
| CDY16557 | Canola | cytosol | 51.09 | 57.7 |
| CDY46962 | Canola | cytosol | 48.55 | 57.67 |
| CDX72530 | Canola | cytosol | 51.82 | 57.0 |
| CDX92536 | Canola | cytosol | 51.64 | 54.93 |
| CDY44912 | Canola | cytosol | 51.45 | 54.74 |
| CDY13993 | Canola | cytosol | 51.45 | 54.74 |
| CDY63783 | Canola | cytosol | 51.45 | 54.74 |
| CDY40789 | Canola | cytosol | 50.91 | 54.47 |
| CDX70450 | Canola | cytosol | 51.45 | 54.11 |
| CDX78468 | Canola | cytosol | 51.45 | 54.11 |
| CDX97174 | Canola | cytosol | 51.27 | 54.02 |
| CDX69700 | Canola | cytosol | 51.27 | 54.02 |
| CDX85697 | Canola | cytosol | 49.09 | 52.63 |
| CDY44125 | Canola | cytosol, plastid | 50.0 | 52.38 |
| CDY54853 | Canola | plastid | 49.64 | 52.0 |
| CDX91168 | Canola | cytosol | 49.27 | 51.82 |
| CDX91224 | Canola | cytosol | 40.55 | 51.38 |
| CDX97315 | Canola | cytosol, plasma membrane | 47.64 | 50.38 |
| CDY32077 | Canola | cytosol | 46.73 | 49.61 |
| CDY36037 | Canola | nucleus, plasma membrane | 47.64 | 49.34 |
| CDY66815 | Canola | cytosol, plastid | 49.27 | 49.09 |
| CDX82244 | Canola | cytosol | 47.64 | 49.06 |
| CDX73219 | Canola | cytosol, mitochondrion | 49.09 | 48.91 |
| CDY24863 | Canola | cytosol | 46.18 | 46.78 |
| CDY07254 | Canola | cytosol | 46.0 | 46.59 |
| CDX82886 | Canola | nucleus, plasma membrane | 46.91 | 46.32 |
| CDX79112 | Canola | cytosol | 46.73 | 45.65 |
| CDY62741 | Canola | endoplasmic reticulum, plasma membrane | 50.73 | 45.37 |
| CDY43077 | Canola | cytosol | 42.91 | 45.21 |
| CDX88038 | Canola | cytosol | 53.09 | 32.3 |
| CDY00964 | Canola | plastid | 0.55 | 0.9 |
| CDY00689 | Canola | plastid | 0.36 | 0.6 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.4 | Gene3D:3.30.200.20 | GO:A0A078FNE3 | UniProt:A0A078FNE3 |
| EnsemblPlants:CDY14419 | ProteinID:CDY14419 | ProteinID:CDY14419.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00079086001 | InterPro:IPR000719 | InterPro:IPR002048 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF13499 | ScanProsite:PS00018 | ScanProsite:PS00107 | PFscan:PS50011 |
| PFscan:PS50222 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF81 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00054 |
| SUPFAM:SSF47473 | SUPFAM:SSF56112 | UniParc:UPI0004EE6B84 | SEG:seg | : | : |
Description
BnaC03g21760DBnaC03g21760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNE3]
Coordinates
chrLK032043:+:226836..229347
Molecular Weight (calculated)
60962.0 Da
IEP (calculated)
5.857
GRAVY (calculated)
-0.366
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNTCTGPKL NPNGFLQSVS AAVWRNQKPD ESLESNKDDS SKKKSVHGGD NAPSAVDPTP STPPPPVKMA NEEAPKCINN DENPKPKKEA HMKRMASAGL
101: QIDSVLGRKT ENLKEIYSVG RKLGQGQFGT TFLCVDKKTN KELACKTIAK RKLTTPEDIE DVRREIQIMH HLSGHPNVIQ IVGAYEDAVG VHVVMEICAG
201: GELFDRIIQR GHYTERKAAE LARTIVGVIE ACHSLGVMHP ALKTIDFGLS VFFKPGETFS DVVGSPYYVA PEVLKKHYSH ECDVWSAGVI IYILLSGVPP
301: FWDETEQGIF EQVLKGDLDF VSEPWPSVSE SAKDLVRRML IRDPKKRMTA HEVLCHPWAR VDGVALDKPL DSAVLSRLKQ FSAMNKLKKI AIKVIAESLS
401: EEEIAGLKEM FKMIDTDNSG HITLEELKKG LDRVGANLKD SEILGLMQAA DIDNSGTIDY GEFIAAMVHL NKIQKEDHLF TAFSYFDKDG SGYITREELQ
501: QGCKQFGLAD VHLDDIISEV DKDNDGRIDY SEFVEMMQDT GFGKMGLRVS
101: QIDSVLGRKT ENLKEIYSVG RKLGQGQFGT TFLCVDKKTN KELACKTIAK RKLTTPEDIE DVRREIQIMH HLSGHPNVIQ IVGAYEDAVG VHVVMEICAG
201: GELFDRIIQR GHYTERKAAE LARTIVGVIE ACHSLGVMHP ALKTIDFGLS VFFKPGETFS DVVGSPYYVA PEVLKKHYSH ECDVWSAGVI IYILLSGVPP
301: FWDETEQGIF EQVLKGDLDF VSEPWPSVSE SAKDLVRRML IRDPKKRMTA HEVLCHPWAR VDGVALDKPL DSAVLSRLKQ FSAMNKLKKI AIKVIAESLS
401: EEEIAGLKEM FKMIDTDNSG HITLEELKKG LDRVGANLKD SEILGLMQAA DIDNSGTIDY GEFIAAMVHL NKIQKEDHLF TAFSYFDKDG SGYITREELQ
501: QGCKQFGLAD VHLDDIISEV DKDNDGRIDY SEFVEMMQDT GFGKMGLRVS
001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS
Arabidopsis Description
CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.