Factsheet for TraesCS2B01G269200.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G127500.1
TraesCS1A01G423000.1
TraesCS1A01G423900.1
TraesCS1A01G424400.1
TraesCS1A01G424500.1
TraesCS1B01G147400.1
TraesCS1B01G388600.1
TraesCS1B01G455100.1
TraesCS1B01G456000.1
TraesCS1B01G456100.1
TraesCS1B01G456200.1
TraesCS1B01G456300.1
TraesCS1B01G456400.1
TraesCS1B01G456500.1
TraesCS1D01G126500.1
TraesCS1D01G432500.1
TraesCS1D01G432700.1
TraesCS1D01G432800.1
TraesCS1D01G432900.1
TraesCS1D01G433100.1
TraesCS1D01G433200.1
TraesCS3A01G028100.1
TraesCS3A01G151400.1
TraesCS3A01G225100.1
TraesCS3B01G018300.1
TraesCS3B01G178600.1
TraesCS3B01G254700.1
TraesCS3D01G017800.1
TraesCS3D01G159600.1
TraesCS3D01G228400.1
TraesCSU01G001400.1
TraesCSU01G001500.1
TraesCSU01G001600.1
TraesCSU01G204200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38910.1	TraesCS1A01G127500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G423000.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G423900.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G424400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G424500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G147400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G388600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G455100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456000.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456200.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456300.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G126500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432700.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432800.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432900.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G433100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G433200.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3A01G028100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3A01G151400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3A01G225100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3B01G018300.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3B01G178600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3B01G254700.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3D01G017800.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3D01G159600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3D01G228400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G001400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G001500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G001600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G204200.1	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G249900.2	Wheat	cytosol, plastid	99.12	99.82
TraesCS2A01G248200.3	Wheat	cytosol, plastid	99.47	99.47
HORVU2Hr1G058530.2	Barley	cytosol, plastid	97.0	97.17
Os07t0161600-01	Rice	plasma membrane	88.16	87.85
EER98014	Sorghum	cytosol, plastid	87.28	85.03
Zm00001d007912_P009	Maize	cytosol, plastid	86.93	82.41
GSMUA_Achr9P25890_001	Banana	plastid	66.08	78.24
TraesCS5B01G428700.1	Wheat	cytosol	77.39	74.74
VIT_08s0032g00780.t01	Wine grape	cytosol	71.73	71.48
PGSC0003DMT400018575	Potato	cytosol	65.72	68.38
Solyc10g076900.1.1	Tomato	cytosol	59.01	66.67
Bra000105.1-P	Field mustard	cytosol	66.43	66.43
CDY07688	Canola	cytosol	64.49	66.36
CDY14419	Canola	cytosol	64.49	66.36
TraesCS4B01G109800.2	Wheat	plastid	60.07	66.28
Solyc01g006730.2.1	Tomato	cytosol	68.02	66.15
PGSC0003DMT400054991	Potato	cytosol	68.02	66.15
AT2G38910.1	Thale cress	cytosol, plastid	67.84	65.87
KRH32931	Soybean	plastid	68.73	65.38
TraesCS5B01G115400.1	Wheat	cytosol	60.25	64.46
TraesCS5B01G428400.2	Wheat	cytosol	71.2	64.27
Solyc10g081640.1.1	Tomato	cytosol	65.55	64.08
TraesCS5B01G109300.1	Wheat	plastid	70.14	63.62
TraesCS6B01G288600.1	Wheat	mitochondrion	60.42	62.41
TraesCS1B01G456700.1	Wheat	cytosol	50.35	61.96
TraesCS2B01G478100.1	Wheat	cytosol, mitochondrion	60.78	61.54
PGSC0003DMT400072292	Potato	cytosol, plastid	65.72	58.31
TraesCS6B01G467300.1	Wheat	cytosol	57.77	57.57
TraesCS3B01G254500.1	Wheat	golgi, unclear	52.47	57.34
TraesCS3B01G365200.1	Wheat	cytosol	51.59	56.37
TraesCS1B01G320400.1	Wheat	cytosol, mitochondrion	50.0	54.74
TraesCS4B01G130300.1	Wheat	cytosol	51.41	54.7
TraesCS2B01G248700.2	Wheat	cytosol	51.06	54.32
TraesCS4B01G321800.1	Wheat	cytosol	52.3	54.01
TraesCS5B01G137600.1	Wheat	cytosol	50.71	53.25
TraesCS2B01G424900.1	Wheat	cytosol	48.76	51.4

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF183	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS2B01G269200
EnsemblPlants:TraesCS2B01G269200.3	TIGR:cd00051	TIGR:cd05117	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:364729890..364734213

Molecular Weight (calculated)

62056.9 Da

IEP (calculated)

4.911

GRAVY (calculated)

-0.270

Length

566 amino acids

Sequence
(BLAST)

001: MGNTCAGPSA GPSATADRHG FFSTVSVAVL WRPGAARAEP AVPPPDSCPS MCSSTSSAGP DLDDSDLSPP SSDPNKPKVK RVQSAGLIAE SVLKRDSERI
101: KDLYTLGKKL GQGQFGTTYK CVEKATGKEF ACKSIAKRKL VTEEDVEDVR REIQIMHHLA GHPNVISIVG AYEDAVAVHL VMELCAGGEL FDRIIQRGHY
201: SEKAAAQLAR VIIGIVEACH SLGVMHRDLK PENFLFVNQK EDSPLKTIDF GLSIFFKPGG IYSDVVGSPY YVAPEVLLKQ YGCEVDVWSA GVIIYILLSG
301: VPPFWDESEQ GIFEQVLQGD LDFSSEPWPS ISKSAKDLVR KMLNRDPGKR LTAHEALCHP WVCVDGVAPD KPLDSAVLTR LKQFSAMNKL KKMALRVIAE
401: NLSEDEIAGL REMFKMLDTD NSGQITLEEL KTGLQRVGAN LKESEIATLM EAADIDNSGS IDYGEFLAAT LHLNKVERED NLFAAFSYFD KDGSGYITQD
501: ELQKACEEFG IGDAHLDDII RDIDQDNDGR IDYNEFVTMM QKGNNPLGKK GQGQMSFGLR EALKIR

Best Arabidopsis Sequence Match ( AT2G38910.1 )
(BLAST)

001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS

Arabidopsis Description

CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.