CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 3
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES20021
KXG22628
KXG22629
KXG24404
KXG28459
KXG31512
OQU77336
OQU77636
OQU87187

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38910.1	EES20021	AT5G24030.1	24280384
AT2G38910.1	KXG22628	AT5G24030.1	24280384
AT2G38910.1	KXG22629	AT5G24030.1	24280384
AT2G38910.1	KXG24404	AT5G24030.1	24280384
AT2G38910.1	KXG28459	AT5G24030.1	24280384
AT2G38910.1	KXG31512	AT5G24030.1	24280384
AT2G38910.1	OQU77336	AT5G24030.1	24280384
AT2G38910.1	OQU77636	AT5G24030.1	24280384
AT2G38910.1	OQU87187	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007912_P009	Maize	cytosol, plastid	93.63	91.12
HORVU2Hr1G058530.2	Barley	cytosol, plastid	85.54	87.96
TraesCS2D01G249900.2	Wheat	cytosol, plastid	84.85	87.72
Os07t0161600-01	Rice	plasma membrane	85.54	87.5
TraesCS2B01G269200.3	Wheat	cytosol, plastid	85.03	87.28
TraesCS2A01G248200.3	Wheat	cytosol, plastid	84.68	86.93
EER90764	Sorghum	plastid	80.03	79.49
GSMUA_Achr9P25890_001	Banana	plastid	64.37	78.24
VIT_08s0032g00780.t01	Wine grape	cytosol	69.36	70.95
PGSC0003DMT400018575	Potato	cytosol	63.68	68.01
Bra000105.1-P	Field mustard	cytosol	65.58	67.31
EES16732	Sorghum	cytosol	59.55	67.18
CDY07688	Canola	cytosol	63.51	67.09
CDY14419	Canola	cytosol	63.51	67.09
AT2G38910.1	Thale cress	cytosol, plastid	67.13	66.9
EES09373	Sorghum	cytosol, plastid	59.21	66.8
Solyc10g076900.1.1	Tomato	cytosol	57.31	66.47
EER93328	Sorghum	cytosol	70.57	66.45
PGSC0003DMT400054991	Potato	cytosol	66.27	66.15
Solyc01g006730.2.1	Tomato	cytosol	66.09	65.98
KRH32931	Soybean	plastid	66.95	65.38
Solyc10g081640.1.1	Tomato	cytosol	64.37	64.59
KXG23457	Sorghum	plastid	67.64	63.8
OQU86029	Sorghum	cytosol	54.91	63.29
EES11322	Sorghum	mitochondrion	60.24	63.06
OQU85618	Sorghum	mitochondrion	60.41	62.12
PGSC0003DMT400072292	Potato	cytosol, plastid	64.37	58.62
EES01094	Sorghum	cytosol, mitochondrion	52.67	58.29
EER95585	Sorghum	cytosol	54.39	58.09
EES01628	Sorghum	cytosol	51.64	57.69
EES19734	Sorghum	plastid	51.64	56.93
EES20022	Sorghum	cytosol, mitochondrion	52.15	56.01
EES07931	Sorghum	cytosol	51.46	55.58
KXG36322	Sorghum	cytosol	50.77	55.56
EES12651	Sorghum	cytosol	48.88	53.28
EES16538	Sorghum	cytosol	52.15	52.79
EER94580	Sorghum	cytosol	46.47	50.19

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	EntrezGene:8081148	UniProt:C5XA82
EnsemblPlants:EER98014	ProteinID:EER98014	ProteinID:EER98014.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488
GO:GO:0005509	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556
GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499
ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF183	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G040800
SUPFAM:SSF47473	SUPFAM:SSF56112	unigene:Sbi.16435	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A84162	RefSeq:XP_002461493.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:3931891..3937297

Molecular Weight (calculated)

63950.1 Da

IEP (calculated)

5.836

GRAVY (calculated)

-0.320

Length

581 amino acids

Sequence
(BLAST)

001: MGNTCVGPST PSDRHSFFNT VSLAVLWRPP AAAAAAARAE PSPTTEPSSS TPSRAPDPVT ISDSEHPPHS TSTSTASVPA AAPPNPNGKP KPKVKRVQSA
101: GLLAGSVLRR DSERLKDLYT LGKKLGQGQF GTTYQCVEKA TGKHFACKSI AKRKLVNEED VEDVRREIQI MHHLSGHPNV VSIVGAYEDA VAVHLVMELC
201: AGGELFDRII QRGHYSEKAA AQLARVIIGA VEACHSLGVM HRDLKPENFL FVNQKEDAPL KAIDFGLSIF FKPGEIFLDV VGSPYYVAPE VLKKHYGCEV
301: DVWSAGVIVY ILLSGVPPFW DESERGIFEQ VLKGDLDFSS DPWPSISESA KDLVRKMLNR DPRKRLTAHE ALCHPWVCVD GVAPDKPLDS AVLTRLKQFS
401: AMNKLKKMAL RVIAENLSED EIAGLREMFK MLDTDNSGQI TLEELKSGLK RIGANLKDSE ITTLMEAADI DNSGSIDYGE FLAATLHLNK VEREDNLFAA
501: FSYFDKDSSG YITHDELQKA CEEFGIEDAH LEDIIRDIDQ DNDGRIDYNE FVTMMQKGNN PLGKKGHYQM SFGLREALKL G

Best Arabidopsis Sequence Match ( AT5G04870.1 )
(BLAST)

001: MGNTCVGPSR NGFLQSVSAA MWRPRDGDDS ASMSNGDIAS EAVSGELRSR LSDEVQNKPP EQVTMPKPGT DVETKDREIR TESKPETLEE ISLESKPETK
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL

Arabidopsis Description

CPK1CPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQJ5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.