Factsheet for PGSC0003DMT400072292

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400021864
PGSC0003DMT400051388
PGSC0003DMT400074359

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38910.1	PGSC0003DMT400021864	AT5G24030.1	24280384
AT2G38910.1	PGSC0003DMT400051388	AT5G24030.1	24280384
AT2G38910.1	PGSC0003DMT400074359	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g081640.1.1	Tomato	cytosol	89.03	98.1
PGSC0003DMT400054991	Potato	cytosol	75.08	82.3
PGSC0003DMT400018575	Potato	cytosol	68.81	80.7
VIT_08s0032g00780.t01	Wine grape	cytosol	68.03	76.41
CDY07688	Canola	cytosol	62.23	72.18
CDY14419	Canola	cytosol	62.07	72.0
Bra000105.1-P	Field mustard	cytosol	63.79	71.91
GSMUA_Achr9P25890_001	Banana	plastid	53.6	71.55
KRH32931	Soybean	plastid	66.3	71.09
AT2G38910.1	Thale cress	cytosol, plastid	64.58	70.67
Zm00001d034376_P001	Maize	plastid	61.6	67.76
PGSC0003DMT400065419	Potato	plastid	61.6	67.64
PGSC0003DMT400002592	Potato	plastid	60.97	67.3
EER90764	Sorghum	plastid	61.13	66.67
Zm00001d013105_P004	Maize	cytosol, plastid	60.81	66.44
Os07t0161600-01	Rice	plasma membrane	59.09	66.37
TraesCS2D01G249900.2	Wheat	cytosol, plastid	58.31	66.19
HORVU2Hr1G058530.2	Barley	cytosol, plastid	58.46	66.02
TraesCS2A01G248200.3	Wheat	cytosol, plastid	58.31	65.72
TraesCS2B01G269200.3	Wheat	cytosol, plastid	58.31	65.72
TraesCS5B01G428700.1	Wheat	cytosol	59.72	65.02
EER98014	Sorghum	cytosol, plastid	58.62	64.37
TraesCS5A01G426800.2	Wheat	cytosol	60.19	62.95
PGSC0003DMT400067082	Potato	cytosol, plastid	49.37	62.87
PGSC0003DMT400060262	Potato	cytosol	49.53	62.82
Zm00001d007912_P009	Maize	cytosol, plastid	58.78	62.81
TraesCS5D01G434800.2	Wheat	cytosol	59.87	62.62
Os03t0789000-00	Rice	cytosol, plasma membrane	57.68	62.48
PGSC0003DMT400054983	Potato	cytosol	58.15	62.04
PGSC0003DMT400002331	Potato	cytosol	48.43	61.19
PGSC0003DMT400072554	Potato	cytosol	57.99	60.96
PGSC0003DMT400043320	Potato	cytosol, plastid	52.51	59.08
PGSC0003DMT400014939	Potato	plastid	45.14	55.71
PGSC0003DMT400024436	Potato	cytosol	45.61	55.53
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	44.04	55.21
PGSC0003DMT400011823	Potato	cytosol	44.98	53.64
PGSC0003DMT400057484	Potato	cytosol	43.73	53.55
PGSC0003DMT400025581	Potato	cytosol	43.1	50.93

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	UniProt:M1CQ10	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG401028133	PGSC:PGSC0003DMG401028133
EnsemblPlants:PGSC0003DMT400072292	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF81	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295C058	:	:

Description

Calcium-dependent protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG401028133]

Coordinates

chr10:-:56313942..56318530

Molecular Weight (calculated)

70176.7 Da

IEP (calculated)

4.965

GRAVY (calculated)

-0.265

Length

638 amino acids

Sequence
(BLAST)

001: MGNNCVGPKL ANNGFLQSVT AAVWKPNQSE NLPLPNEGEP NSENSVDSSK GAVDRSCIQG NPPPHLMINV DTKMGVKENN DVVIANDVTV TDKPPVEGVK
101: QNKPTHVRRT SSIGVQIESV LGRKTGNLKE IYSLGRKLGQ GQFGTTFLCL GKSCGKQYAC KSIAKRRLTT EEDVEDVRRE IQIMHHLAGQ PSVVQIVGAY
201: EDAVAVHVVM ELCAGGELFD RILQRGHYSE KKAAELARVI VGVVEACHSL GVMHRDLKPE NFLFADQEEE STLKAIDFGL SVFFKPGEIF NDVVGSPYYV
301: APEVLRKHYG LECDIWSAGV IIYILLSGVP PFWDETEQGI FEQVLTGELD FASEPWPAIS ESAKDLVRKM LVRDPKKRLT AHEVLCHPWV RVGGVAPDKP
401: LDCAVLSRLN QFSAMNKLKK IAIRVIAESL SGEEIAGLKE MFKMIDADNS GHITLEELKT GLERVGANLN DSEIVSLMQA ADVDNSGTID YGEFIAAMLH
501: LNKIQKEDHM YAAFSYFDED GSGYITQDEL QKACDKFGLS NIPIEELMRE VDQDNDGRID YSEFVAMMQD TGFGDKGSKR STTIAARSTI ELLGTVTREV
601: HPEGDFDTIL ARAGEASTGK APYPCNCFPS TLRHPLQV

Best Arabidopsis Sequence Match ( AT2G38910.1 )
(BLAST)

001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS

Arabidopsis Description

CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.