Factsheet for PGSC0003DMT400043320

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g074570.1.1	Tomato	cytosol, plastid	96.12	97.85
CDY47496	Canola	cytosol	75.66	89.56
KRH74107	Soybean	cytosol	82.89	85.61
KRH14008	Soybean	cytosol	83.6	84.95
CDX69129	Canola	nucleus, plasma membrane	80.25	83.64
CDX75493	Canola	cytosol	80.25	83.49
AT2G17290.2	Thale cress	cytosol	79.72	83.09
CDX87997	Canola	cytosol	78.66	82.75
CDY26800	Canola	cytosol	79.89	82.66
Bra009653.1-P	Field mustard	cytosol	78.48	82.56
CDY07866	Canola	cytosol	78.48	82.56
GSMUA_Achr4P29450_001	Banana	cytosol	78.66	82.29
CDX72530	Canola	cytosol	72.49	82.2
Bra037277.1-P	Field mustard	cytosol	79.37	81.67
AT4G35310.1	Thale cress	cytosol	79.54	81.12
CDY52603	Canola	cytosol	63.84	80.98
GSMUA_Achr2P11030_001	Banana	cytosol	70.19	79.13
Os04t0584600-02	Rice	mitochondrion	75.84	78.04
Zm00001d002540_P002	Maize	cytosol, mitochondrion	74.07	76.78
TraesCS2D01G456400.1	Wheat	cytosol, mitochondrion	75.13	76.62
EES11322	Sorghum	mitochondrion	74.96	76.58
TraesCS2A01G456100.1	Wheat	plastid	75.31	76.52
Zm00001d026018_P001	Maize	mitochondrion	74.78	76.26
TraesCS2B01G478100.1	Wheat	cytosol, mitochondrion	75.13	76.21
TraesCS6D01G242000.2	Wheat	mitochondrion	73.37	75.91
TraesCS6B01G288600.1	Wheat	mitochondrion	73.37	75.91
OQU86029	Sorghum	cytosol	67.37	75.79
TraesCS6A01G261200.1	Wheat	mitochondrion	73.37	75.64
Zm00001d051502_P004	Maize	mitochondrion	74.25	74.91
OQU85618	Sorghum	mitochondrion	73.72	73.98
Os02t0832000-01	Rice	plasma membrane	67.72	70.46
GSMUA_Achr1P02840_001	Banana	cytosol, plastid	77.95	70.05
TraesCS6A01G421000.1	Wheat	cytosol	68.25	68.98
TraesCS6D01G404800.1	Wheat	cytosol	68.08	68.81
HORVU6Hr1G066470.15	Barley	cytosol	68.08	67.96
TraesCS6B01G467300.1	Wheat	cytosol	68.08	67.96
HORVU6Hr1G094990.2	Barley	cytosol, plastid	67.72	67.61
PGSC0003DMT400060262	Potato	cytosol	59.61	67.2
PGSC0003DMT400067082	Potato	cytosol, plastid	59.26	67.07
PGSC0003DMT400002331	Potato	cytosol	59.61	66.93
PGSC0003DMT400002592	Potato	plastid	63.67	62.46
PGSC0003DMT400065419	Potato	plastid	63.49	61.96
PGSC0003DMT400018575	Potato	cytosol	59.08	61.58
PGSC0003DMT400054991	Potato	cytosol	61.02	59.45
PGSC0003DMT400014939	Potato	plastid	53.97	59.19
PGSC0003DMT400024436	Potato	cytosol	53.62	58.02
PGSC0003DMT400054983	Potato	cytosol	60.49	57.36
PGSC0003DMT400072554	Potato	cytosol	61.02	57.0
PGSC0003DMT400011823	Potato	cytosol	53.62	56.82
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	50.09	55.8
PGSC0003DMT400057484	Potato	cytosol	50.26	54.7
PGSC0003DMT400025581	Potato	cytosol	50.62	53.15
PGSC0003DMT400072292	Potato	cytosol, plastid	59.08	52.51

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	UniProt:M1BEF5	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400016820	PGSC:PGSC0003DMG400016820
EnsemblPlants:PGSC0003DMT400043320	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029563EF	SEG:seg	:

Description

Calcium-dependent protein kinase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400016820]

Coordinates

chr10:+:48146416..48150729

Molecular Weight (calculated)

63370.3 Da

IEP (calculated)

5.708

GRAVY (calculated)

-0.374

Length

567 amino acids

Sequence
(BLAST)

001: MGNTCRGSIG GKTFQGYTQP EDSSCSTNHN PSSGNSYSSS DNFSPTSNAQ QNSNHKKEHS LSLVSPRKAR MNRSGSNQAY YVMGHMTPNI RDLYTLGRKL
101: GQGQFGTTYL CTENSTGAEY ACKSISKRKL ISKEDVEDVR REIQIMHHLS GHRNIVTIKG AYEDPLYVHI VMEICSGGEL FDRIIQRGHY SERKAAELTK
201: IIVGVVEACH SLGVMHRDLK PENFLLVNKD NDFSLKAIDF GLSVFFKPGQ IFTDVVGSPY YVAPEVLLKH YGPEADVWTA GVILYILLSG VPPFWAETQQ
301: GIFDAVLKGH IDFDSDPWPL ISESAKDLIR KMLCMQPSER LTAHEVLCHP WICENGVAPD RALDPAVLSR LKQFSAMNKL KKMALRVIAE SLSEEEIAGL
401: REMFKAMDTD SSGAITFDEL KAGLRKYGST LKDTEIRELM DAAIDVANLQ FQADVDNSGT IDYGEFIAAT VHLNKLEREE HLMAAFQYFD KDGSGYITVD
501: EVQQACIEHN MTDVYFEDII REVDQDNDGR IDYGEFVAMM QKGNPCIGRR TMRNSLNLSM RDAPGAQ

Best Arabidopsis Sequence Match ( AT2G17290.2 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.