Factsheet for PGSC0003DMT400072554

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g081740.1.1	Tomato	cytosol	78.91	95.99
PGSC0003DMT400054983	Potato	cytosol	74.46	75.59
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	58.81	70.97
PGSC0003DMT400002592	Potato	plastid	66.72	70.07
GSMUA_AchrUn_...	Banana	cytosol	64.42	69.57
VIT_08s0032g01220.t01	Wine grape	cytosol	66.39	69.48
PGSC0003DMT400065419	Potato	plastid	66.06	69.02
KRH72128	Soybean	plastid	66.06	68.31
PGSC0003DMT400018575	Potato	cytosol	59.47	66.36
PGSC0003DMT400067082	Potato	cytosol, plastid	53.71	65.07
Os03t0788500-01	Rice	cytosol	63.59	64.44
KRG96293	Soybean	cytosol	62.77	64.25
KRH68038	Soybean	cytosol	62.44	64.24
Zm00001d040996_P003	Maize	plastid	64.09	63.88
EER93328	Sorghum	cytosol	64.58	63.53
PGSC0003DMT400002331	Potato	cytosol	52.72	63.37
Zm00001d034372_P001	Maize	cytosol	63.76	63.24
PGSC0003DMT400054991	Potato	cytosol	60.46	63.06
KXG23457	Sorghum	plastid	63.43	62.5
TraesCS5B01G109300.1	Wheat	plastid	63.26	61.54
TraesCS5D01G124000.1	Wheat	plastid	63.1	61.38
PGSC0003DMT400060262	Potato	cytosol	50.74	61.23
TraesCS5D01G434500.2	Wheat	cytosol	62.93	61.22
Zm00001d013109_P002	Maize	plasma membrane	62.44	61.13
TraesCS5B01G428400.2	Wheat	cytosol	63.1	61.08
TraesCS5A01G426500.1	Wheat	cytosol	63.1	61.08
PGSC0003DMT400043320	Potato	cytosol, plastid	57.0	61.02
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	64.42	60.71
PGSC0003DMT400072292	Potato	cytosol, plastid	60.96	57.99
GSMUA_Achr7P01360_001	Banana	cytosol	63.1	57.08
PGSC0003DMT400014939	Potato	plastid	48.43	56.87
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	46.95	55.99
HORVU5Hr1G030810.1	Barley	cytosol	63.26	55.73
PGSC0003DMT400024436	Potato	cytosol	48.11	55.73
PGSC0003DMT400011823	Potato	cytosol	48.93	55.51
PGSC0003DMT400057484	Potato	cytosol	46.13	53.74
PGSC0003DMT400025581	Potato	cytosol	46.13	51.85
Os12t0486600-00	Rice	plasma membrane	60.79	47.86

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102589594	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M1CQI8	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400028229
PGSC:PGSC0003DMG400028229	EnsemblPlants:PGSC0003DMT400072554	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF161	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295C722	RefSeq:XP_006339179.2
SEG:seg	:	:	:	:	:

Description

Calcium-dependent protein kinase CDPK12 [Source:PGSC_GENE;Acc:PGSC0003DMG400028229]

Coordinates

chr10:+:56231427..56236694

Molecular Weight (calculated)

68351.8 Da

IEP (calculated)

5.661

GRAVY (calculated)

-0.451

Length

607 amino acids

Sequence
(BLAST)

001: MGNNCVHSKF TKGGFFNLFF WRSRSPDMIT NKKKPKGIEH STDKQPEREN SIQNKPPEMV MIDREKPDQE HKKDTQVVKQ EKISVDLKPN EAIQPEKSDN
101: TIHQKAKPKE SAKPKKPHVK RMLSAGLQVE SVLKTKTGLL KEHYDLGDKL GHGQFGTTFL CVEKATGEKY ACKSIAKRKL LTPEDVEDVR REIQIMHHLS
201: GNPNVISIKA AYEDGVAVHV VMELCSGGEL FDRIVKQGHY TERQAAELAR TIVGVVEACH ALGVLHLDLK PENFLFVNEK EDSPLKIIDF GLSMFFKPGQ
301: IFSDIVGSPY YVAPEVLQKR YGQEADIWSA GVIIYILLTG VPPFWGESEQ EIFDEVLRAD IDFTSDPWPN ISGDAKDLVK RMLVRDPRQR LTAHEVLCHP
401: WVKIDGVAPD KPLDSAVLSR LTQFSAMNKL KKMALMVIAE SLSEEEIAGL KEMFKMIDTD DSGHITLDEL KVGLKQFGAD LSETEIRDLM KAADVDNSGT
501: IDYGEFIAAM LHVNKAEKED YLSAAFSYFD KDGSGYITAD ELQKACEDFG MKDVRLEEII QEVDQDNDGR IDYSEFVAMM QKGNANFGNR RLPNNFSIGF
601: RDATKVC

Best Arabidopsis Sequence Match ( AT2G17290.2 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.