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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 2
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU5Hr1G055480.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G10660.1 HORVU5Hr1G055480.1 AT5G24030.1 24280384
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G124000.1 Wheat plastid 86.65 95.67
TraesCS5B01G109300.1 Wheat plastid 86.5 95.51
KXG23457 Sorghum plastid 76.63 85.71
Zm00001d040996_P003 Maize plastid 74.75 84.56
VIT_13s0175g00080.t01 Wine grape cytosol, plastid 62.26 75.4
Solyc10g081740.1.1 Tomato cytosol 52.54 72.55
CDX70192 Canola cytosol, plastid 59.8 72.03
KRG90147 Soybean cytosol, plastid 60.52 72.02
CDX98791 Canola cytosol, plastid 59.51 71.55
KRH33395 Soybean endoplasmic reticulum, nucleus 60.23 71.43
CDX80925 Canola cytosol 59.07 71.03
CDY08584 Canola cytosol 59.36 71.01
Solyc04g009800.2.1 Tomato cytosol, plastid 59.65 70.74
PGSC0003DMT400002592 Potato plastid 59.22 70.59
CDY00963 Canola plastid 58.78 70.56
Solyc11g006370.1.1 Tomato plastid 59.07 70.42
CDY11313 Canola cytosol 59.94 70.24
PGSC0003DMT400065419 Potato plastid 59.22 70.22
HORVU2Hr1G058530.2 Barley cytosol, plastid 57.47 70.09
Bra009420.1-P Field mustard cytosol, plastid 60.09 70.05
VIT_08s0032g01220.t01 Wine grape cytosol 58.35 69.31
KRH72128 Soybean plastid 58.06 68.14
CDX73914 Canola plastid 59.22 68.11
AT5G04870.1 Thale cress cytosol, plastid 60.23 68.03
CDY00688 Canola plastid 58.93 67.67
Bra005824.1-P Field mustard cytosol, plastid 59.51 67.66
HORVU4Hr1G019530.1 Barley plastid 49.93 66.67
HORVU5Hr1G032550.3 Barley cytosol 49.49 65.58
Solyc01g006840.2.1 Tomato cytosol 55.59 64.05
PGSC0003DMT400054983 Potato cytosol 55.59 64.05
AT3G10660.1 Thale cress cytosol, plastid 59.36 63.31
PGSC0003DMT400072554 Potato cytosol 55.73 63.26
Os12t0486600-00 Rice plasma membrane 69.96 62.52
KRH68038 Soybean cytosol 52.98 61.86
KRG96293 Soybean cytosol 52.1 60.54
HORVU1Hr1G092710.1 Barley cytosol, plasma membrane 41.94 60.21
HORVU6Hr1G094990.2 Barley cytosol, plastid 48.77 59.15
HORVU6Hr1G066470.15 Barley cytosol 48.04 58.27
HORVU4Hr1G082790.1 Barley cytosol 44.27 55.66
HORVU5Hr1G044550.1 Barley cytosol 43.69 55.54
HORVU1Hr1G068240.1 Barley cytosol, plastid 42.09 55.13
HORVU0Hr1G032220.1 Barley cytosol, plastid 42.09 55.13
HORVU2Hr1G046660.1 Barley cytosol 43.11 54.9
HORVU2Hr1G096270.5 Barley plastid 39.91 53.61
HORVU4Hr1G026640.5 Barley endoplasmic reticulum, mitochondrion, plasma membrane 41.8 53.04
HORVU3Hr1G079040.4 Barley cytosol 41.07 50.63
HORVU3Hr1G055730.3 Barley plastid 43.4 50.34
Bra029859.1-P Field mustard plastid 62.26 45.16
Bra001373.1-P Field mustard plastid 62.7 44.54
CDY00964 Canola plastid 3.34 6.87
CDY00689 Canola plastid 2.76 5.69
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20UniProt:A0A287QSY5InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005509GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU5Hr1G030810
EnsemblPlants:HORVU5Hr1G030810.1InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499
ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349
PANTHER:PTHR24349:SF164InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220SUPFAM:SSF47473
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000B484665SEG:seg::
Description
No Description!
Coordinates
chrchr5H:-:190765746..190773270
Molecular Weight (calculated)
76287.9 Da
IEP (calculated)
6.918
GRAVY (calculated)
-0.449
Length
689 amino acids
Sequence
(BLAST)
001: GYLLPRTKTT NHPRLTASDV GRCFPAERAP FRRRCSGHGT HTEEEKPCAL IAVVIVRRRC RRSTRPMGNV CVGPRRSFAK NGFFSTISGS IWRNRPAASS
101: SPSEPTTTSR SVPVVQPIAS APSPEVKPPA PEPTPTAPPA PIVISEPARP PPQQHPPPAG TEADTPPAPP PSQQQPSSQP AQPQPRQQSR PKKPAGHIKR
201: ISSAGLQVES VLRRKTDNLK DKYSLGRKLG QGQFGTTYLC VDKATALEYA CKSIAKRKLI TDEDVEDVRR EIQIMHHLAG HPNIISIRGA YEDAVAVHVV
301: MELCAGGELF DRIVRRGHYT ERQAAELARV IVAVVESCHS LGVMHRDLKP ENFLFVGNEE DAALKTIDFG LSMFFRPGEI FSDVVGSPYY VAPEVLKKNY
401: SQEADVWSAG VIVYILLCGV PPFWAETEQG IFEQVLHGTL DFESDPWPSV SEGAKDLLRK VLVRDPKKRL TAHQVLCHPW LQMSGEAPDK PLDSAVLSRL
501: KQFSAMNKLK KMALRVIAEN LSEEEIAGLK EMFKMMDTDN SGQINYEELK AGLERVGANM KECEISQLMQ AADIDNSGTI DYGEFIAATL HLNKVEREDH
601: LYAAFQYFDK DGSGYITADE LQQACDEFGI EDVRLDDMIG EVDQDNDGRI DYNEFVAMMH KSTAGFGKKS HQYNLSVGLR DALNIKSNS
Best Arabidopsis Sequence Match ( AT3G10660.2 )
(BLAST)
001: MGNACVGPNI SGNGFLQTVT AAMWRPRIGA EQASSSSHGN GQVSKEAASE PATDQVQNKP PEPITMPSSK TNPETKLKPD LEIQPEEKKE KVLAEETKQK
101: VVPEESKQEV PPEESKREVV VQPESAKPET KSESKPETTK PETTSETKPE TKAEPQKPKH MRRVSSAGLR TESVLQRKTE NFKEFYSLGR KLGQGQFGTT
201: FLCLEKGTGN EYACKSISKR KLLTDEDVED VRREIQIMHH LAGHPNVISI KGAYEDVVAV HLVMELCSGG ELFDRIIQRG HYTERKAAEL ARTIVGVLEA
301: CHSLGVMHRD LKPENFLFVS REEDSLLKTI DFGLSMFFKP DEVFTDVVGS PYYVAPEVLR KRYGPESDVW SAGVIVYILL SGVPPFWAET EQGIFEQVLH
401: GDLDFSSDPW PSISESAKDL VRKMLVRDPK RRLTAHQVLC HPWVQIDGVA PDKPLDSAVL SRMKQFSAMN KFKKMALRVI AESLSEEEIA GLKQMFKMID
501: ADNSGQITFE ELKAGLKRVG ANLKESEILD LMQAADVDNS GTIDYKEFIA ATLHLNKIER EDHLFAAFSY FDKDESGFIT PDELQQACEE FGVEDARIEE
601: MMRDVDQDKD GRIDYNEFVA MMQKGSIMGG PVKMGLENSI SISLKH
Arabidopsis Description
CPK2Calcium-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38870]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.