CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX80404
CDX87147
CDX88065
CDY44267
CDY46973

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10660.1	CDX80404	AT5G24030.1	24280384
AT3G10660.1	CDX87147	AT5G24030.1	24280384
AT3G10660.1	CDX88065	AT5G24030.1	24280384
AT3G10660.1	CDY44267	AT5G24030.1	24280384
AT3G10660.1	CDY46973	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08584	Canola	cytosol	94.08	93.75
CDY00688	Canola	plastid	90.59	86.67
CDX73914	Canola	plastid	88.15	84.47
CDX98791	Canola	cytosol, plastid	83.62	83.77
CDX80925	Canola	cytosol	83.62	83.77
CDX70192	Canola	cytosol, plastid	83.45	83.74
AT3G10660.1	Thale cress	cytosol, plastid	91.99	81.73
CDY11313	Canola	cytosol	83.45	81.46
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	76.66	77.33
Solyc11g006370.1.1	Tomato	plastid	75.61	75.09
PGSC0003DMT400002592	Potato	plastid	75.61	75.09
Solyc04g009800.2.1	Tomato	cytosol, plastid	75.96	75.04
PGSC0003DMT400065419	Potato	plastid	75.61	74.7
KRG90147	Soybean	cytosol, plastid	75.09	74.44
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	64.63	73.76
KRH33395	Soybean	endoplasmic reticulum, nucleus	74.56	73.67
GSMUA_AchrUn_...	Banana	cytosol	72.13	73.67
CDY54794	Canola	cytosol	58.71	70.06
CDY59100	Canola	cytosol	58.71	70.06
CDY47496	Canola	cytosol	58.01	69.52
Os03t0788500-01	Rice	cytosol	71.25	68.28
CDY14419	Canola	cytosol	64.63	67.45
CDY07688	Canola	cytosol	64.63	67.45
Zm00001d040996_P003	Maize	plastid	70.91	66.83
EER93328	Sorghum	cytosol	71.08	66.13
KXG23457	Sorghum	plastid	70.91	66.07
Zm00001d034372_P001	Maize	cytosol	70.21	65.85
TraesCS5D01G434500.2	Wheat	cytosol	71.25	65.54
TraesCS5A01G426500.1	Wheat	cytosol	71.43	65.39
Zm00001d013109_P002	Maize	plasma membrane	70.56	65.32
TraesCS5B01G428400.2	Wheat	cytosol	71.25	65.23
TraesCS5B01G109300.1	Wheat	plastid	70.73	65.06
TraesCS5D01G124000.1	Wheat	plastid	70.56	64.9
CDY37101	Canola	cytosol	56.1	64.79
CDX87164	Canola	cytosol	54.7	64.74
CDY40426	Canola	cytosol	46.17	64.63
CDY16860	Canola	cytosol	54.7	64.61
CDX90725	Canola	cytosol	56.27	64.6
CDY05064	Canola	cytosol	56.27	64.6
CDX73342	Canola	nucleus, plasma membrane	55.92	64.59
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	72.13	64.29
CDX87997	Canola	cytosol	59.93	63.82
CDX80376	Canola	cytosol	54.53	63.75
CDY07866	Canola	cytosol	59.76	63.64
CDX69129	Canola	nucleus, plasma membrane	60.28	63.6
CDY46963	Canola	cytosol	47.04	63.38
CDX75493	Canola	cytosol	60.1	63.3
CDY46964	Canola	cytosol	53.14	63.15
CDY10955	Canola	cytosol	41.29	63.03
CDY26800	Canola	cytosol	60.1	62.96
CDX92440	Canola	cytosol	54.18	62.96
CDY40788	Canola	cytosol	52.96	62.81
CDY52603	Canola	cytosol	48.78	62.64
CDY16557	Canola	cytosol	53.14	62.63
CDX72530	Canola	cytosol	54.01	62.0
CDY40790	Canola	cytosol	49.48	61.47
CDY46962	Canola	cytosol	49.48	61.34
GSMUA_Achr7P01360_001	Banana	cytosol	71.43	61.1
CDY40789	Canola	cytosol	53.14	59.34
CDY44912	Canola	cytosol	52.96	58.8
HORVU5Hr1G030810.1	Barley	cytosol	70.56	58.78
CDX69700	Canola	cytosol	53.14	58.43
CDX97174	Canola	cytosol	53.14	58.43
CDX92536	Canola	cytosol	52.61	58.41
CDY63783	Canola	cytosol	52.61	58.41
CDY13993	Canola	cytosol	52.44	58.22
Bra029859.1-P	Field mustard	plastid	95.99	58.0
CDX78468	Canola	cytosol	52.79	57.94
CDX70450	Canola	cytosol	52.61	57.74
CDX91224	Canola	cytosol	43.38	57.37
CDX85697	Canola	cytosol	50.17	56.14
CDX97315	Canola	cytosol, plasma membrane	50.52	55.77
CDY36037	Canola	nucleus, plasma membrane	51.22	55.37
CDY44125	Canola	cytosol, plastid	50.52	55.24
CDX91168	Canola	cytosol	50.17	55.07
CDX82244	Canola	cytosol	51.22	55.06
CDY54853	Canola	plastid	50.0	54.67
CDY32077	Canola	cytosol	47.56	52.7
CDY66815	Canola	cytosol, plastid	50.35	52.36
CDX73219	Canola	cytosol, mitochondrion	50.17	52.17
CDY07254	Canola	cytosol	48.43	51.2
CDY24863	Canola	cytosol	48.26	51.01
CDX82886	Canola	nucleus, plasma membrane	49.48	50.99
CDY43077	Canola	cytosol	46.17	50.77
Os12t0486600-00	Rice	plasma membrane	67.77	50.45
CDX79112	Canola	cytosol	49.3	50.27
CDY62741	Canola	endoplasmic reticulum, plasma membrane	50.0	46.67
CDX88038	Canola	cytosol	54.53	34.62
CDY00964	Canola	plastid	0.52	0.9
CDY00689	Canola	plastid	0.35	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	GO:A0A078ENA7	EnsemblPlants:CDY00963
ProteinID:CDY00963	ProteinID:CDY00963.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00110974001	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF81	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEECF2	SEG:seg

Description

BnaC05g42370D

Coordinates

chrLK031923:-:321868..325618

Molecular Weight (calculated)

64385.1 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.368

Length

574 amino acids

Sequence
(BLAST)

001: MGNVCVGPNL SGNGFLQTVS AALWKPRIGA EQAFFPWQCT TSSQRSSCRI VVQVETSTKP EPKPEPTKPE SKPETNPETK PDPSKPKHMR RVSSAGLRTE
101: SVLQRKTENF KEFYSLGRKL GQGQFGTTFL CLEKGTGNEY ACKSISKRKL LTEEDVEDVR REIQIMHHLA GHPNVISIKG AYEDVVAVHL VMELCSGGEL
201: FDRIIQRGHY TERKAAELAR TIVGVLETCH SLGVMHRDLK PENFLFVSRE EDSLLKTIDF GLSMFFKPDE VFTDVVGSPY YVAPEVLRKR YGPESDVWSA
301: GVIIYILLSG VPPFWAETEQ GIFEQVLHGD LDFSSDPWPS ISDGAKDLVQ KMLVRDPKRR LTAHQVLCHP WVQIDGVAPD KPLDSAVLSR MKQFSAMNKF
401: KKMALRVIAE SLSEEEIAGL KEMFKMIDAD NSGQITFEEL KAGLKRVGAN LKESEILDLM QAADVDNSGT IDYKEFIAAT LHLNKIEKED HLFAAFSYFD
501: KDGSGFITPD ELQHACEEFG VEDARIEEMM RDVDQDKDGR IDYNEFVAMM QKGSIMGGPM KMGLEKSISI SLKH

Best Arabidopsis Sequence Match ( AT3G10660.2 )
(BLAST)

001: MGNACVGPNI SGNGFLQTVT AAMWRPRIGA EQASSSSHGN GQVSKEAASE PATDQVQNKP PEPITMPSSK TNPETKLKPD LEIQPEEKKE KVLAEETKQK
101: VVPEESKQEV PPEESKREVV VQPESAKPET KSESKPETTK PETTSETKPE TKAEPQKPKH MRRVSSAGLR TESVLQRKTE NFKEFYSLGR KLGQGQFGTT
201: FLCLEKGTGN EYACKSISKR KLLTDEDVED VRREIQIMHH LAGHPNVISI KGAYEDVVAV HLVMELCSGG ELFDRIIQRG HYTERKAAEL ARTIVGVLEA
301: CHSLGVMHRD LKPENFLFVS REEDSLLKTI DFGLSMFFKP DEVFTDVVGS PYYVAPEVLR KRYGPESDVW SAGVIVYILL SGVPPFWAET EQGIFEQVLH
401: GDLDFSSDPW PSISESAKDL VRKMLVRDPK RRLTAHQVLC HPWVQIDGVA PDKPLDSAVL SRMKQFSAMN KFKKMALRVI AESLSEEEIA GLKQMFKMID
501: ADNSGQITFE ELKAGLKRVG ANLKESEILD LMQAADVDNS GTIDYKEFIA ATLHLNKIER EDHLFAAFSY FDKDESGFIT PDELQQACEE FGVEDARIEE
601: MMRDVDQDKD GRIDYNEFVA MMQKGSIMGG PVKMGLENSI SISLKH

Arabidopsis Description

CPK2Calcium-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38870]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.