Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G124000.1 | Wheat | plastid | 97.44 | 97.44 |
| HORVU5Hr1G030810.1 | Barley | cytosol | 95.51 | 86.5 |
| KXG23457 | Sorghum | plastid | 84.13 | 85.23 |
| Zm00001d040996_P003 | Maize | plastid | 82.21 | 84.24 |
| VIT_13s0175g00080.t01 | Wine grape | cytosol, plastid | 68.59 | 75.22 |
| Solyc10g081740.1.1 | Tomato | cytosol | 57.85 | 72.34 |
| KRG90147 | Soybean | cytosol, plastid | 66.99 | 72.19 |
| CDX70192 | Canola | cytosol, plastid | 66.03 | 72.03 |
| KRH33395 | Soybean | endoplasmic reticulum, nucleus | 66.67 | 71.6 |
| CDX98791 | Canola | cytosol, plastid | 65.71 | 71.55 |
| CDX80925 | Canola | cytosol | 65.54 | 71.38 |
| CDY08584 | Canola | cytosol | 65.71 | 71.18 |
| Solyc04g009800.2.1 | Tomato | cytosol, plastid | 66.03 | 70.91 |
| PGSC0003DMT400002592 | Potato | plastid | 65.54 | 70.76 |
| CDY00963 | Canola | plastid | 65.06 | 70.73 |
| Solyc11g006370.1.1 | Tomato | plastid | 65.38 | 70.59 |
| CDY11313 | Canola | cytosol | 66.51 | 70.58 |
| PGSC0003DMT400065419 | Potato | plastid | 65.54 | 70.4 |
| TraesCS2B01G269200.3 | Wheat | cytosol, plastid | 63.62 | 70.14 |
| Bra009420.1-P | Field mustard | cytosol, plastid | 66.35 | 70.05 |
| VIT_08s0032g01220.t01 | Wine grape | cytosol | 64.42 | 69.31 |
| KRH72128 | Soybean | plastid | 64.58 | 68.65 |
| TraesCS5B01G428700.1 | Wheat | cytosol | 64.1 | 68.26 |
| AT5G04870.1 | Thale cress | cytosol, plastid | 66.67 | 68.2 |
| Bra005824.1-P | Field mustard | cytosol, plastid | 66.03 | 67.99 |
| CDX73914 | Canola | plastid | 65.22 | 67.95 |
| CDY00688 | Canola | plastid | 65.06 | 67.67 |
| TraesCS5B01G428400.2 | Wheat | cytosol | 67.63 | 67.3 |
| TraesCS4B01G109800.2 | Wheat | plastid | 54.81 | 66.67 |
| PGSC0003DMT400054983 | Potato | cytosol | 61.38 | 64.05 |
| TraesCS5B01G115400.1 | Wheat | cytosol | 54.17 | 63.89 |
| Solyc01g006840.2.1 | Tomato | cytosol | 61.22 | 63.88 |
| AT3G10660.1 | Thale cress | cytosol, plastid | 65.71 | 63.47 |
| PGSC0003DMT400072554 | Potato | cytosol | 61.54 | 63.26 |
| TraesCS6B01G288600.1 | Wheat | mitochondrion | 54.81 | 62.41 |
| Os12t0486600-00 | Rice | plasma membrane | 77.08 | 62.39 |
| KRH68038 | Soybean | cytosol | 58.65 | 62.03 |
| TraesCS1B01G456700.1 | Wheat | cytosol | 45.51 | 61.74 |
| TraesCS2B01G478100.1 | Wheat | cytosol, mitochondrion | 54.97 | 61.36 |
| KRG96293 | Soybean | cytosol | 57.21 | 60.2 |
| TraesCS3B01G365200.1 | Wheat | cytosol | 49.2 | 59.27 |
| TraesCS6B01G467300.1 | Wheat | cytosol | 53.53 | 58.8 |
| TraesCS3B01G254500.1 | Wheat | golgi, unclear | 47.76 | 57.53 |
| TraesCS1B01G320400.1 | Wheat | cytosol, mitochondrion | 47.28 | 57.06 |
| TraesCS4B01G130300.1 | Wheat | cytosol | 48.24 | 56.58 |
| TraesCS2B01G248700.2 | Wheat | cytosol | 48.08 | 56.39 |
| TraesCS5B01G137600.1 | Wheat | cytosol | 48.24 | 55.84 |
| TraesCS4B01G321800.1 | Wheat | cytosol | 48.88 | 55.66 |
| TraesCS2B01G424900.1 | Wheat | cytosol | 45.67 | 53.07 |
| Bra029859.1-P | Field mustard | plastid | 65.54 | 43.05 |
| Bra001373.1-P | Field mustard | plastid | 66.19 | 42.58 |
| CDY00964 | Canola | plastid | 0.48 | 0.9 |
| CDY00689 | Canola | plastid | 0.32 | 0.6 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.4 | Gene3D:3.30.200.20 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR002048 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF13499 | ScanProsite:PS00018 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS50222 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF164 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00054 | SMART:SM00220 | SUPFAM:SSF47473 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5B01G109300 |
| EnsemblPlants:TraesCS5B01G109300.1 | TIGR:cd00051 | TIGR:cd05117 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5B:-:153468392..153503912
Molecular Weight (calculated)
68904.9 Da
IEP (calculated)
5.675
GRAVY (calculated)
-0.433
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVCVGPRR SFAKKGFFST ISGSIWRNRS AAPSSSPSEP TTTSRSVPVV QPTASAPPPE VKPPAPEPTP TAPPAPIVIS EPAIPPPQQH PQPAEKEANT
101: PSPPPPLEQQ PSSQPAQPQP RQQSQPKKPS GHIKRISSAG LQVQSVLRRK TDNLKDKYSL GRKLGQGQFG TTYLCVDKAT GLEYACKSIA KRKLITDEDV
201: EDVRREIQIM HHLAGHPNII SIRGAYEDAV AVHVVMELCA GGELFDRIVR RGHYTERQAA ELARVIVAVV ESCHSLGVMH RDLKPENFLF VGNEEDAALK
301: TIDFGLSMFF RPGEMFSDVV GSPYYVAPEV LKKSYSQEAD VWSAGVIVYI LLCGVPPFWA ETEQGIFEQV LKGTLDFESD PWPSVSEGAK DLLRKVLVRD
401: PKKRLTAHQV LCHPWLQMSG EAPDKPLDSA VLSRLKQFSA MNKLRKMALR VIAENLSEEE IAGLKEMFKM MDTDNSGQIN YEELKAGLER VGANMKESEI
501: SQLMQAADID NSGTIDYGEF IAATLHLNKV DREDHLYAAF QYFDKDGSGY ITADELQQAC DEFGIEDVRL EDMIGEVDQD NDGRIDYNEF VAMMQKSTAG
601: FGKKGHQYNV SVGLRDALNI KSNS
101: PSPPPPLEQQ PSSQPAQPQP RQQSQPKKPS GHIKRISSAG LQVQSVLRRK TDNLKDKYSL GRKLGQGQFG TTYLCVDKAT GLEYACKSIA KRKLITDEDV
201: EDVRREIQIM HHLAGHPNII SIRGAYEDAV AVHVVMELCA GGELFDRIVR RGHYTERQAA ELARVIVAVV ESCHSLGVMH RDLKPENFLF VGNEEDAALK
301: TIDFGLSMFF RPGEMFSDVV GSPYYVAPEV LKKSYSQEAD VWSAGVIVYI LLCGVPPFWA ETEQGIFEQV LKGTLDFESD PWPSVSEGAK DLLRKVLVRD
401: PKKRLTAHQV LCHPWLQMSG EAPDKPLDSA VLSRLKQFSA MNKLRKMALR VIAENLSEEE IAGLKEMFKM MDTDNSGQIN YEELKAGLER VGANMKESEI
501: SQLMQAADID NSGTIDYGEF IAATLHLNKV DREDHLYAAF QYFDKDGSGY ITADELQQAC DEFGIEDVRL EDMIGEVDQD NDGRIDYNEF VAMMQKSTAG
601: FGKKGHQYNV SVGLRDALNI KSNS
001: MGNTCVGPSR NGFLQSVSAA MWRPRDGDDS ASMSNGDIAS EAVSGELRSR LSDEVQNKPP EQVTMPKPGT DVETKDREIR TESKPETLEE ISLESKPETK
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL
Arabidopsis Description
CPK1CPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQJ5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.