CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES20021
KXG22628
KXG22629
KXG24404
KXG28459
KXG31512
OQU77336
OQU77636
OQU87187

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10660.1	EES20021	AT5G24030.1	24280384
AT3G10660.1	KXG22628	AT5G24030.1	24280384
AT3G10660.1	KXG22629	AT5G24030.1	24280384
AT3G10660.1	KXG24404	AT5G24030.1	24280384
AT3G10660.1	KXG28459	AT5G24030.1	24280384
AT3G10660.1	KXG31512	AT5G24030.1	24280384
AT3G10660.1	OQU77336	AT5G24030.1	24280384
AT3G10660.1	OQU77636	AT5G24030.1	24280384
AT3G10660.1	OQU87187	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040996_P003	Maize	plastid	93.02	94.09
TraesCS5D01G124000.1	Wheat	plastid	85.71	84.62
TraesCS5B01G109300.1	Wheat	plastid	85.23	84.13
HORVU5Hr1G030810.1	Barley	cytosol	85.71	76.63
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	69.64	75.4
Solyc10g081740.1.1	Tomato	cytosol	58.93	72.75
KRG90147	Soybean	cytosol, plastid	68.34	72.71
PGSC0003DMT400002592	Potato	plastid	67.53	71.97
Solyc11g006370.1.1	Tomato	plastid	67.53	71.97
KRH33395	Soybean	endoplasmic reticulum, nucleus	67.69	71.77
CDX70192	Canola	cytosol, plastid	66.56	71.68
Solyc04g009800.2.1	Tomato	cytosol, plastid	67.53	71.6
PGSC0003DMT400065419	Potato	plastid	67.37	71.43
CDX98791	Canola	cytosol, plastid	66.23	71.2
CDY00963	Canola	plastid	66.07	70.91
CDX80925	Canola	cytosol	65.91	70.86
CDY08584	Canola	cytosol	65.91	70.49
EER90764	Sorghum	plastid	66.23	69.74
CDY11313	Canola	cytosol	66.56	69.73
Bra009420.1-P	Field mustard	cytosol, plastid	66.88	69.71
EER93328	Sorghum	cytosol	69.48	69.37
VIT_08s0032g01220.t01	Wine grape	cytosol	65.26	69.31
KRH72128	Soybean	plastid	65.42	68.65
AT5G04870.1	Thale cress	cytosol, plastid	67.05	67.7
EER98014	Sorghum	cytosol, plastid	63.8	67.64
Bra005824.1-P	Field mustard	cytosol, plastid	66.07	67.16
CDX73914	Canola	plastid	65.1	66.94
CDY00688	Canola	plastid	64.94	66.67
EES09373	Sorghum	cytosol, plastid	55.52	66.41
EES16732	Sorghum	cytosol	55.03	65.83
Solyc01g006840.2.1	Tomato	cytosol	62.34	64.21
PGSC0003DMT400054983	Potato	cytosol	62.34	64.21
OQU86029	Sorghum	cytosol	52.11	63.69
PGSC0003DMT400072554	Potato	cytosol	62.5	63.43
AT3G10660.1	Thale cress	cytosol, plastid	65.75	62.69
KRH68038	Soybean	cytosol	59.58	62.2
EES11322	Sorghum	mitochondrion	55.68	61.8
Os12t0486600-00	Rice	plasma membrane	77.11	61.61
OQU85618	Sorghum	mitochondrion	56.49	61.59
KRG96293	Soybean	cytosol	58.44	60.71
EER95585	Sorghum	cytosol	50.97	57.72
EES01094	Sorghum	cytosol, mitochondrion	48.38	56.76
EES01628	Sorghum	cytosol	47.89	56.73
KXG36322	Sorghum	cytosol	48.38	56.12
EES19734	Sorghum	plastid	47.4	55.41
EES20022	Sorghum	cytosol, mitochondrion	48.54	55.27
EES07931	Sorghum	cytosol	46.92	53.72
EES12651	Sorghum	cytosol	46.27	53.47
EES16538	Sorghum	cytosol	47.56	51.05
EER94580	Sorghum	cytosol	43.02	49.26
Bra029859.1-P	Field mustard	plastid	65.91	42.74
Bra001373.1-P	Field mustard	plastid	65.91	41.86
CDY00964	Canola	plastid	0.49	0.9
CDY00689	Canola	plastid	0.32	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	UniProt:A0A1B6PCU8	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR002048	EnsemblPlants:KXG23457	ProteinID:KXG23457	ProteinID:KXG23457.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF164	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
EnsemblPlantsGene:SORBI_3008G097800	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0003C6B44D	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:46430095..46432869

Molecular Weight (calculated)

68461.3 Da

IEP (calculated)

5.445

GRAVY (calculated)

-0.468

Length

616 amino acids

Sequence
(BLAST)

001: MGNVCVGSRF SKNGGFFGNF SLWPSRSRSS GSTPSNPTTT SRSVPVVQVQ PSESDAKPEP AQITEPPAPI VISEQAPLPQ PEPKPKPSEP DPSPPPPAPA
101: SQQPAQPQQQ QQQAPPRQQS RKKAAHIKRI SSAGLQVESV LRRKTDNLKD KYSLGRKLGQ GQFGTTYLCV DKATGLEYAC KSIAKRKLVT DEDVEDVRRE
201: IQIMHHLAGH PNIIGIRGAF EDAVAVHVVM ELCAGGELFD RIVRRGHYTE RQAGELARVI VAVVESCHSL GVMHRDLKPE NFLFVGNDEE SPLKTIDFGL
301: SMFFRPGEEF TDVVGSPYYV APEVLKKRYG QEADVWSAGV IIYILLCGVP PFWAETEQGI FEQVLHGSLD FESDPWPSVS ENAKDLLRKV LVRDPKKRLT
401: AHQVLCHPWL QTIASAPDKP LDSAVLSRLK QFSAMNKLKK MALRVIAENL SEEEIAGLKE MFKMMDTDNS GQINFEELKA GLQRVGANMK EPEIYQLMQA
501: ADIDNSGTID YGEFIAATLH LNKVEREDHL FAAFQYFDKD GSGYITADEL QQACDEFGIE DVRLEDMIGE VDQDNDGRID YNEFVEMMQK STTGFGKKGH
601: QYNLSIGFRD ALKANS

Best Arabidopsis Sequence Match ( AT5G04870.1 )
(BLAST)

001: MGNTCVGPSR NGFLQSVSAA MWRPRDGDDS ASMSNGDIAS EAVSGELRSR LSDEVQNKPP EQVTMPKPGT DVETKDREIR TESKPETLEE ISLESKPETK
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL

Arabidopsis Description

CPK1CPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQJ5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.