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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027480_P002 Maize cytosol 95.22 95.22
TraesCS4B01G321800.1 Wheat cytosol 82.9 82.3
TraesCS5A01G490200.1 Wheat cytosol 82.72 82.12
TraesCS4D01G318400.2 Wheat cytosol 82.17 81.57
HORVU4Hr1G082790.1 Barley cytosol 81.99 81.39
EER94580 Sorghum cytosol 64.89 65.61
EES11322 Sorghum mitochondrion 65.62 64.32
OQU86029 Sorghum cytosol 59.38 64.09
OQU85618 Sorghum mitochondrion 65.44 63.01
EES09373 Sorghum cytosol, plastid 54.6 57.67
EES16732 Sorghum cytosol 54.04 57.09
EER90764 Sorghum plastid 59.93 55.73
EES01628 Sorghum cytosol 52.39 54.81
EER98014 Sorghum cytosol, plastid 58.09 54.39
EES19734 Sorghum plastid 52.57 54.27
EES01094 Sorghum cytosol, mitochondrion 51.29 53.14
KXG36322 Sorghum cytosol 51.29 52.54
EES20022 Sorghum cytosol, mitochondrion 52.02 52.31
EER93328 Sorghum cytosol 59.01 52.03
EES07931 Sorghum cytosol 50.74 51.3
KXG23457 Sorghum plastid 57.72 50.97
EES16538 Sorghum cytosol 51.47 48.78
EES12651 Sorghum cytosol 46.88 47.84
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EntrezGene:8085698UniProt:C5WZY9
EnsemblPlants:EER95585ProteinID:EER95585ProteinID:EER95585.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488
GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009409GO:GO:0009628GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556
GO:GO:0046777InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499
ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349
PANTHER:PTHR24349:SF119InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220EnsemblPlantsGene:SORBI_3001G520900
SUPFAM:SSF47473SUPFAM:SSF56112unigene:Sbi.9787InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A831C6RefSeq:XP_002468587.1
Description
hypothetical protein
Coordinates
chr1:-:78622695..78627520
Molecular Weight (calculated)
61650.8 Da
IEP (calculated)
5.038
GRAVY (calculated)
-0.331
Length
544 amino acids
Sequence
(BLAST)
001: MGNQCPNGTL GSDYYNRPAS RFADGCLDDD RYSDLKKFDK PWPEVNSFKP TAAGILKRGL DPTAITVLER KTEDLREHYI IGRRLGQGQF GTTYLCTEIS
101: TGCEYACKTI PKRKLITKED VEDVRREIQI MHHLSGHKNV VAIKDVYEDG QAVHIVMELC AGGELFDRIQ EKGHYSEQKA AELIRIIISI VAMCHSLGVM
201: HRDLKPENFL LLDKEDDLSI KAIDFGLSVF FKPGQVFTEL VGSPYYIAPE VLHKRYGPEV DVWSAGVMLY VLLSGVPPFW AETQQGIFDA VLKGHIDFDS
301: DPWPKISESA KNLIRKMLCP CPSERLKAYE VLRHPWICEN GVATDQALDP SVLSRLKQFS AMNKLKKLAL RVIAERLSEE EIAGLRQMFK AVDVQNRGVI
401: TFGELRQGLR RYGTELEDRE ISDIMEAADK DNNVTINYEE FIAATVPLNK IEREEHLMAA FTYFDKDGSG YITVDKLQRA CGEHNMEDTF LEEIILEVDQ
501: NNDGQIDYAE FVAMMQGDKV GLGWQPMETT LNVTLRDAPQ VHCH
Best Arabidopsis Sequence Match ( AT2G17290.2 )
(BLAST)
001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV
Arabidopsis Description
CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.