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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G424900.1 Wheat cytosol 84.05 83.43
TraesCS2D01G404200.1 Wheat cytosol 83.49 83.33
TraesCS2A01G407200.1 Wheat cytosol 83.68 82.75
HORVU2Hr1G096270.5 Barley plastid 78.8 81.87
Os04t0560600-01 Rice plasma membrane 80.68 80.68
Zm00001d026139_P001 Maize cytosol 84.24 75.72
Solyc04g081910.2.1 Tomato cytosol, plastid 64.17 65.64
Bra015796.1-P Field mustard cytosol, plastid 64.17 64.9
KRH17481 Soybean cytosol 64.54 64.06
VIT_18s0001g00990.t01 Wine grape plastid 62.66 63.86
PGSC0003DMT400025581 Potato cytosol 64.17 63.33
KXG36322 Sorghum cytosol 62.48 62.71
CDY66815 Canola cytosol, plastid 64.17 61.96
CDX73219 Canola cytosol, mitochondrion 63.6 61.41
KRH05995 Soybean cytosol 58.35 60.62
AT1G76040.2 Thale cress cytosol 63.79 60.61
KRH05994 Soybean cytosol 60.04 59.7
EES19734 Sorghum plastid 54.78 55.41
EES01628 Sorghum cytosol 54.03 55.38
EES01094 Sorghum cytosol, mitochondrion 54.41 55.24
OQU86029 Sorghum cytosol 51.22 54.17
EES16732 Sorghum cytosol 52.16 53.98
EES20022 Sorghum cytosol, mitochondrion 54.6 53.79
EES07931 Sorghum cytosol 53.85 53.35
EES09373 Sorghum cytosol, plastid 51.22 53.01
EES11322 Sorghum mitochondrion 54.97 52.79
OQU85618 Sorghum mitochondrion 54.97 51.86
EES16538 Sorghum cytosol 54.03 50.17
EER98014 Sorghum cytosol, plastid 53.28 48.88
EER90764 Sorghum plastid 52.16 47.52
EER93328 Sorghum cytosol 54.97 47.49
EER95585 Sorghum cytosol 47.84 46.88
KXG23457 Sorghum plastid 53.47 46.27
EER94580 Sorghum cytosol 41.46 41.08
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EntrezGene:8056596UniProt:C5YDX9
ncoils:CoilEnsemblPlants:EES12651ProteinID:EES12651ProteinID:EES12651.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004683
GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009605GO:GO:0009607GO:GO:0009628GO:GO:0009719GO:GO:0009738GO:GO:0009931
GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016740GO:GO:0018105GO:GO:0019538
GO:GO:0035556GO:GO:0046777GO:GO:0050832GO:GO:1901002InterPro:IPR000719InterPro:IPR002048
InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF177InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00054SMART:SM00220EnsemblPlantsGene:SORBI_3006G177500SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A8765ARefSeq:XP_002448323.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr6:-:53233035..53235667
Molecular Weight (calculated)
59704.5 Da
IEP (calculated)
6.264
GRAVY (calculated)
-0.442
Length
533 amino acids
Sequence
(BLAST)
001: MGNCFTKTHE QEIPITTDPP YRPSSSMPQY RPPHKAREVP LTSGSGGSRR PPPPRLPAFP SSGTGSMGSR RAPAGQIGPI LQRPMVDVRT LFHLERKLGS
101: GQFGTTYLCT ERATGRKYAC KSVSKRKLVR RADIDDMRRE ITILQHLSGQ PNVAEFKGAF EDADDVHVVM EFCSGGELFD RITAKGSYSE RQAAAVCRDI
201: LTVVHVCHFM GVMHRDLKPE NFLLASPADD APLKAIDFGL SVFIEEGKVY KDIVGSAYYV APEVLHRNYG REIDVWSAGV ILYILLCGSP PFWAETEKGI
301: FDAILAGELD LISSPWPSIS ENAKDLIRRM LNRDPRRRIT AVQALEHPWL KGGAPDRPID SAVLSRMKQF KAMNKLKQLA LKVIAENLTE DEIKGLKQMF
401: NNMDTDKSGT ITVEELKEGL TKLGSKISEA EVQKLMEAVD VDKSGSIDYA EFLTAMMNKH KLEKEEDLIR AFQHFDKDDS GYITRDELQQ AMAEYGISDE
501: ASIKEVLDEV DKDKDGRIDY EEFVEMMKKG SYT
Best Arabidopsis Sequence Match ( AT1G76040.2 )
(BLAST)
001: MLQNQHKTTK NQRNKNIGTK YFLRKKIMGF CFSKFGKSQT HEIPISSSSD SSPPHHYQPL PKPTVSQGQT SNPTSNPQPK PKPAPPPPPS TSSGSQIGPI
101: LNRPMIDLSA LYDLHKELGR GQFGITYKCT DKSNGREYAC KSISKRKLIR RKDIEDVRRE VMILQHLTGQ PNIVEFRGAY EDKDNLHLVM ELCSGGELFD
201: RIIKKGSYSE KEAANIFRQI VNVVHVCHFM GVVHRDLKPE NFLLVSNEED SPIKATDFGL SVFIEEGKVY RDIVGSAYYV APEVLHRNYG KEIDVWSAGV
301: MLYILLSGVP PFWGETEKTI FEAILEGKLD LETSPWPTIS ESAKDLIRKM LIRDPKKRIT AAEALEHPWM TDTKISDKPI NSAVLVRMKQ FRAMNKLKKL
401: ALKVIAENLS EEEIKGLKQT FKNMDTDESG TITFDELRNG LHRLGSKLTE SEIKQLMEAA DVDKSGTIDY IEFVTATMHR HRLEKEENLI EAFKYFDKDR
501: SGFITRDELK HSMTEYGMGD DATIDEVIND VDTDNDGRIN YEEFVAMMRK GTTDSDPKLI R
Arabidopsis Description
CPK29calcium-dependent protein kinase 29 [Source:TAIR;Acc:AT1G76040]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.