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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 4
  • cytosol 4
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004998_P001 Maize cytosol 93.12 90.76
Zm00001d052438_P001 Maize cytosol, plastid 89.59 87.8
EES16538 Sorghum cytosol 87.73 82.23
Os11t0136600-00 Rice extracellular 80.11 79.67
TraesCS4A01G187900.1 Wheat cytosol 78.62 79.51
TraesCS4D01G125500.1 Wheat cytosol 78.44 79.32
TraesCS4B01G130300.1 Wheat cytosol 77.88 78.76
GSMUA_Achr8P01680_001 Banana cytosol 70.26 75.3
GSMUA_Achr10P... Banana cytosol 70.26 75.15
TraesCS5B01G137600.1 Wheat cytosol 74.91 74.77
HORVU5Hr1G044550.1 Barley cytosol 75.28 74.72
TraesCS5D01G153800.1 Wheat cytosol 75.09 74.68
TraesCS5A01G138300.1 Wheat cytosol 74.91 74.49
HORVU4Hr1G026640.5 Barley endoplasmic reticulum, mitochondrion, plasma membrane 74.91 74.22
EES19734 Sorghum plastid 71.56 73.06
EES01628 Sorghum cytosol 70.26 72.69
GSMUA_Achr8P21660_001 Banana cytosol 62.64 71.1
CDX97174 Canola cytosol 68.77 70.88
CDX69700 Canola cytosol 68.77 70.88
Bra008910.1-P Field mustard cytosol 68.4 70.5
Bra020035.1-P Field mustard cytosol 67.47 70.21
AT5G19360.1 Thale cress cytosol 68.22 70.17
Solyc12g099790.1.1 Tomato cytosol 69.7 70.09
PGSC0003DMT400011823 Potato cytosol 69.7 70.09
PGSC0003DMT400024436 Potato cytosol 68.22 70.04
CDY63783 Canola cytosol 67.29 70.02
CDY44912 Canola cytosol 67.29 70.02
AT5G12180.1 Thale cress cytosol 68.59 69.89
Bra002231.1-P Field mustard cytosol 67.1 69.83
CDX92536 Canola cytosol 67.1 69.83
CDX78468 Canola cytosol 67.84 69.79
VIT_06s0009g03150.t01 Wine grape cytosol 69.14 69.66
CDY13993 Canola cytosol 66.91 69.63
CDX70450 Canola cytosol 67.66 69.6
KRH73535 Soybean cytosol 68.03 69.45
KRH14593 Soybean cytosol 68.22 69.38
Solyc11g064900.1.1 Tomato cytosol 68.22 69.38
Bra006142.1-P Field mustard cytosol 66.91 68.83
GSMUA_Achr5P27580_001 Banana cytosol 69.7 68.56
Solyc01g008740.1.1 Tomato cytosol 68.77 68.39
KRG89696 Soybean cytosol, mitochondrion 68.96 67.95
KRH50623 Soybean cytosol 67.84 67.47
Bra023367.1-P Field mustard cytosol 64.31 67.45
CDX85697 Canola cytosol 64.31 67.45
CDX91168 Canola cytosol 64.68 66.54
EES01094 Sorghum cytosol, mitochondrion 60.59 62.1
KXG36322 Sorghum cytosol 59.48 60.26
EES20022 Sorghum cytosol, mitochondrion 59.67 59.33
EES16732 Sorghum cytosol 54.46 56.89
EES09373 Sorghum cytosol, plastid 53.72 56.12
OQU86029 Sorghum cytosol 51.67 55.16
EES11322 Sorghum mitochondrion 55.95 54.23
EES12651 Sorghum cytosol 53.35 53.85
OQU85618 Sorghum mitochondrion 55.95 53.27
EER98014 Sorghum cytosol, plastid 55.58 51.46
EER95585 Sorghum cytosol 51.3 50.74
EER90764 Sorghum plastid 54.46 50.09
EER93328 Sorghum cytosol 56.88 49.59
KXG23457 Sorghum plastid 53.72 46.92
EER94580 Sorghum cytosol 42.94 42.94
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EntrezGene:8069270UniProt:C5Y427
EnsemblPlants:EES07931ProteinID:EES07931ProteinID:EES07931.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488
GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009738GO:GO:0009931
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556
GO:GO:0046777InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499
ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349
PANTHER:PTHR24349:SF240InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220EnsemblPlantsGene:SORBI_3005G025400
SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A86163RefSeq:XP_002448943.1SEG:seg
Description
hypothetical protein
Coordinates
chr5:+:2278931..2281549
Molecular Weight (calculated)
58849.2 Da
IEP (calculated)
6.317
GRAVY (calculated)
-0.403
Length
538 amino acids
Sequence
(BLAST)
001: MGQCCSKGTG EAAAAAAESA PKAQAASRSA SSANNERPSS SSAAAGGGTT KPASPTGGGK PATAAAVGPV LGRPMEDVRD THSMGKELGR GQFGVTHLCT
101: HRASGEKLAC KTIAKRKLAT KEDVDDVRRE VQIMHHLSGQ PNVVALRGAY EDKQSVHLVM ELCAGGELFD RIIARGQYTE RGAAALLRTI VRIVHTCHAM
201: GVMHRDIKPE NFLLLSKDED APLKATDFGL SVFFKEGEML RDIVGSAYYI APEVLKRKYG PEADIWSVGV MLYIFLAGVP PFWAENENGI FTAILRGQLD
301: LSSEPWPHIS QGAKDLVKKM LNINPKERLT AFQVLNHPWI KEDGDAPDTP LDNVVLGRLK QFRAMNQFKK AALRIIAGCL SEEEITGLKE MFKNIDKDNS
401: GTITLDELKH GLAKHGPKLS DSEMEKLMEA ADADGNGLID YDEFVTATVH MNKLDREEHL YTAFQYFDKD NSGYITKEEL EHALKEQGLY DADKIKEVIS
501: DADSDNDGRI DYSEFVAMMR KGTAGADPMN KKRRDVVL
Best Arabidopsis Sequence Match ( AT5G12180.1 )
(BLAST)
001: MGNCCSHGRD SADNGDALEN GASASNAANS TGPTAEASVP QSKHAPPSPP PATKQGPIGP VLGRPMEDVK ASYSLGKELG RGQFGVTHLC TQKATGHQFA
101: CKTIAKRKLV NKEDIEDVRR EVQIMHHLTG QPNIVELKGA YEDKHSVHLV MELCAGGELF DRIIAKGHYS ERAAASLLRT IVQIVHTCHS MGVIHRDLKP
201: ENFLLLNKDE NSPLKATDFG LSVFYKPGEV FKDIVGSAYY IAPEVLKRKY GPEADIWSIG VMLYILLCGV PPFWAESENG IFNAILRGHV DFSSDPWPSI
301: SPQAKDLVKK MLNSDPKQRL TAAQVLNHPW IKEDGEAPDV PLDNAVMSRL KQFKAMNNFK KVALRVIAGC LSEEEIMGLK EMFKGMDTDS SGTITLEELR
401: QGLAKQGTRL SEYEVQQLME AADADGNGTI DYGEFIAATM HINRLDREEH LYSAFQHFDK DNSGYITMEE LEQALREFGM NDGRDIKEII SEVDGDNDGR
501: INYDEFVAMM RKGNPDPIPK KRRELSFK
Arabidopsis Description
CPK17CPK17 [Source:UniProtKB/TrEMBL;Acc:A0A178URQ6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.