CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

nucleus: 24646378
plasma membrane: 24646378

gfp PMID: 24646378 doi

H Zhang, WZ Liu, Y Zhang, M Deng, F Niu, B Yang, X Wang, B Wang, W Liang, MK Deyholos, YQ Jiang

State Key Laboratory of Crop Stress Biology for Arid Areas and College of Life Sciences, Northwest A & F University, Yangling, Shaanxi 712100, China. yangwl@nwafu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79112	Canola	cytosol	98.74	97.69
AT4G21940.2	Thale cress	cytosol, plastid	85.82	85.2
CDX97315	Canola	cytosol, plasma membrane	77.2	82.69
CDX91224	Canola	cytosol	62.48	80.18
KXG36322	Sorghum	cytosol	67.68	71.0
GSMUA_Achr6P29450_001	Banana	cytosol	59.78	70.85
Os07t0515100-01	Rice	cytosol	67.5	70.54
TraesCS2A01G223100.2	Wheat	cytosol	67.33	70.49
TraesCS2B01G248700.2	Wheat	cytosol	67.33	70.49
Zm00001d006479_P005	Maize	plasma membrane	67.15	70.43
Zm00001d021623_P001	Maize	plasma membrane	66.97	70.24
CDY36037	Canola	nucleus, plasma membrane	65.53	68.74
CDX82244	Canola	cytosol	65.53	68.35
CDY10955	Canola	cytosol	45.24	67.02
HORVU2Hr1G046660.1	Barley	cytosol	64.99	66.91
TraesCS2D01G229100.2	Wheat	cytosol	64.99	66.91
CDY24863	Canola	cytosol	64.99	66.67
CDY07254	Canola	cytosol	64.63	66.3
CDY43077	Canola	cytosol	58.17	62.07
CDY63783	Canola	cytosol	55.83	60.15
CDX92536	Canola	cytosol	55.83	60.15
CDX69700	Canola	cytosol	56.37	60.15
CDX97174	Canola	cytosol	56.37	60.15
CDY13993	Canola	cytosol	55.66	59.96
CDY44912	Canola	cytosol	55.48	59.77
CDY47496	Canola	cytosol	51.35	59.71
CDY59100	Canola	cytosol	51.53	59.67
CDY54794	Canola	cytosol	51.53	59.67
CDX78468	Canola	cytosol	56.01	59.66
CDY66815	Canola	cytosol, plastid	59.07	59.6
CDX70450	Canola	cytosol	55.83	59.46
CDX73219	Canola	cytosol, mitochondrion	58.71	59.24
CDX85697	Canola	cytosol	54.22	58.87
CDY44125	Canola	cytosol, plastid	55.3	58.67
CDX91168	Canola	cytosol	54.4	57.94
CDY54853	Canola	plastid	54.58	57.9
GSMUA_Achr2P13980_001	Banana	plasma membrane	63.73	56.53
CDY37101	Canola	cytosol	50.09	56.14
CDX73342	Canola	nucleus, plasma membrane	49.91	55.94
CDX87164	Canola	cytosol	48.65	55.88
CDY16860	Canola	cytosol	48.47	55.56
CDX80376	Canola	cytosol	48.65	55.19
CDY46962	Canola	cytosol	45.78	55.08
CDY05064	Canola	cytosol	49.37	55.0
CDX90725	Canola	cytosol	49.37	55.0
CDY46964	Canola	cytosol	47.58	54.87
CDY40788	Canola	cytosol	47.58	54.75
CDY40790	Canola	cytosol	45.24	54.55
CDY46963	Canola	cytosol	41.65	54.46
CDX87997	Canola	cytosol	52.6	54.36
CDY07866	Canola	cytosol	52.42	54.17
CDY52603	Canola	cytosol	43.45	54.14
CDX92440	Canola	cytosol	47.76	53.85
CDY26800	Canola	cytosol	52.42	53.28
CDY16557	Canola	cytosol	46.32	52.98
CDX75493	Canola	cytosol	50.99	52.11
CDX69129	Canola	nucleus, plasma membrane	50.81	52.02
CDY40789	Canola	cytosol	47.22	51.17
CDX72530	Canola	cytosol	45.78	51.0
CDX70192	Canola	cytosol, plastid	51.89	50.52
CDX98791	Canola	cytosol, plastid	51.89	50.44
CDX80925	Canola	cytosol	51.71	50.26
CDY40426	Canola	cytosol	36.98	50.24
CDY00963	Canola	plastid	50.99	49.48
CDY11313	Canola	cytosol	52.06	49.32
CDY08584	Canola	cytosol	50.81	49.13
CDY62741	Canola	endoplasmic reticulum, plasma membrane	53.86	48.78
CDY00688	Canola	plastid	51.17	47.5
CDX73914	Canola	plastid	50.63	47.08
CDY07688	Canola	cytosol	46.32	46.91
CDY14419	Canola	cytosol	46.32	46.91
CDY32077	Canola	cytosol	38.42	41.31
CDX88038	Canola	cytosol	48.47	29.87
CDY00689	Canola	plastid	0.36	0.6
CDY00964	Canola	plastid	0.36	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	GO:A0A078D0G6	EnsemblPlants:CDX82886
ProteinID:CDX82886	ProteinID:CDX82886.1	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00138256001	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF174	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE1A8B
SEG:seg	:	:	:	:	:

Description

BnaC01g13360D

Coordinates

chrLK031830:+:1101004..1103736

Molecular Weight (calculated)

63030.2 Da

IEP (calculated)

6.217

GRAVY (calculated)

-0.501

Length

557 amino acids

Sequence
(BLAST)

001: MGCFSSKHRR TQSDVVNGNV QRSIPTNQSQ THVPRDVTAH SSIPTNQSQT HNHHHNPQEQ QESKPVNQPI EEYQVFKPLK PIALLETETI LGKPFEQIKR
101: LYTLGHELGR GQFGITYTCK ENSTGNTYAC KSILKRKLTR KQDRDDVKKE IQIMQHLSGQ KNIVEIRGAY EDRQSIHLVM ELCGGGELFD RIIAQGHYSE
201: RAAAGVIRSV LNVVQICHFM GVMHRDLKPE NFLLSSKDED AMLKATDFGL SVFIEEGKVY RDIVGSAYYV APEVLRRSYG KEIDIWSAGI ILYILLCGVP
301: PFWAETEKGI FEEIIKGEID FESQPWPSIS ESAKDLVRKL LTMDPRKRIS AAQALEHPWI RGGEAPDNPI DSAVLSRMKQ FRAMNKLKKL ALKVIAESLS
401: EEEIKGLKTM FANMDTDQSG TITYEELKTG LARLGSKLSE AEVKQLMEAA DVDGNGTIDY IEFISATMHR YRLDRDEHLF KAFQYFDKDN SGFITMDELK
501: SAMKEYGMGD ETSIKEVIAE VDTDNDGRIN YEEFCAMMRS GTTQPQQGKT SSIPLID

Best Arabidopsis Sequence Match ( AT4G21940.1 )
(BLAST)

001: MGCFSSKHRN TESDIINGSV QSSIPTNQPE NHVSRDVLKP QKPPSPQIPT TTQSNHHHQQ ESKPVNQQIE KKHVLTQPLK PIVFRETETI LGKPFEEIRK
101: LYTLGKELGR GQFGITYTCK ENSTGNTYAC KSILKRKLTR KQDIDDVKRE IQIMQYLSGQ ENIVEIKGAY EDRQSIHLVM ELCGGSELFD RIIAQGHYSE
201: KAAAGVIRSV LNVVQICHFM GVIHRDLKPE NFLLASTDEN AMLKATDFGL SVFIEEGKVY RDIVGSAYYV APEVLRRSYG KEIDIWSAGI ILYILLCGVP
301: PFWSETEKGI FNEIIKGEID FDSQPWPSIS ESAKDLVRKL LTKDPKQRIS AAQALEHPWI RGGEAPDKPI DSAVLSRMKQ FRAMNKLKKL ALKVIAESLS
401: EEEIKGLKTM FANMDTDKSG TITYEELKNG LAKLGSKLTE AEVKQLMEAA DVDGNGTIDY IEFISATMHR YRFDRDEHVF KAFQYFDKDN SGFITMDELE
501: SAMKEYGMGD EASIKEVIAE VDTDNDGRIN YEEFCAMMRS GITLPQQGKI LPVQ

Arabidopsis Description

CPK15Calcium-dependent protein kinase 15 [Source:UniProtKB/TrEMBL;Acc:F4JKC7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.