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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plasma membrane: 26746009
msms PMID: 26746009 doi
S Chen, Y Luo, G Ding, F Xu
National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018504.1-P Field mustard cytosol 100.0 100.0
CDX91224 Canola cytosol 80.96 97.0
AT4G04720.2 Thale cress cytosol 94.23 92.28
CDX82886 Canola nucleus, plasma membrane 82.69 77.2
CDX79112 Canola cytosol 82.69 76.38
Os07t0515100-01 Rice cytosol 74.42 72.61
GSMUA_Achr6P29450_001 Banana cytosol 65.38 72.34
KXG36322 Sorghum cytosol 73.85 72.32
Zm00001d021623_P001 Maize plasma membrane 73.46 71.94
TraesCS2A01G223100.2 Wheat cytosol 73.46 71.8
TraesCS2B01G248700.2 Wheat cytosol 73.46 71.8
Zm00001d006479_P005 Maize plasma membrane 73.08 71.56
CDY36037 Canola nucleus, plasma membrane 70.38 68.93
CDX82244 Canola cytosol 70.38 68.54
TraesCS2D01G229100.2 Wheat cytosol 70.96 68.21
HORVU2Hr1G046660.1 Barley cytosol 70.96 68.21
CDY10955 Canola cytosol 49.23 68.09
CDY24863 Canola cytosol 70.38 67.4
CDY07254 Canola cytosol 70.0 67.03
CDY43077 Canola cytosol 63.08 62.84
CDY44912 Canola cytosol 61.73 62.09
CDX92536 Canola cytosol 61.54 61.9
CDY63783 Canola cytosol 61.54 61.9
CDY54794 Canola cytosol 57.12 61.75
CDY59100 Canola cytosol 57.12 61.75
CDY13993 Canola cytosol 61.35 61.7
CDX69700 Canola cytosol 61.92 61.69
CDX97174 Canola cytosol 61.92 61.69
CDX78468 Canola cytosol 61.54 61.19
CDX70450 Canola cytosol 61.54 61.19
CDY47496 Canola cytosol 56.15 60.96
CDX85697 Canola cytosol 60.0 60.82
CDX91168 Canola cytosol 60.19 59.85
CDY44125 Canola cytosol, plastid 60.38 59.81
CDY66815 Canola cytosol, plastid 63.27 59.6
CDX73219 Canola cytosol, mitochondrion 62.88 59.24
CDY54853 Canola plastid 59.62 59.05
GSMUA_Achr2P13980_001 Banana plasma membrane 69.42 57.48
CDY37101 Canola cytosol 53.85 56.34
CDX87164 Canola cytosol 52.5 56.29
CDX73342 Canola nucleus, plasma membrane 53.65 56.14
CDY52603 Canola cytosol 48.08 55.93
CDY16860 Canola cytosol 52.12 55.76
CDX87997 Canola cytosol 57.31 55.29
CDY05064 Canola cytosol 53.08 55.2
CDX90725 Canola cytosol 53.08 55.2
CDX80376 Canola cytosol 52.12 55.19
CDY07866 Canola cytosol 57.12 55.1
CDY46963 Canola cytosol 44.81 54.69
CDY46962 Canola cytosol 48.65 54.64
CDY26800 Canola cytosol 57.5 54.56
CDY40788 Canola cytosol 50.58 54.34
CDY46964 Canola cytosol 50.38 54.24
CDY40790 Canola cytosol 48.08 54.11
CDX69129 Canola nucleus, plasma membrane 56.54 54.04
CDX75493 Canola cytosol 56.54 53.95
CDX92440 Canola cytosol 50.77 53.44
CDY16557 Canola cytosol 49.81 53.18
CDX72530 Canola cytosol 50.0 52.0
CDX98791 Canola cytosol, plastid 56.73 51.48
CDX80925 Canola cytosol 56.54 51.31
CDX70192 Canola cytosol, plastid 56.35 51.22
CDY40426 Canola cytosol 40.38 51.22
CDY40789 Canola cytosol 50.38 50.97
CDY00963 Canola plastid 55.77 50.52
CDY62741 Canola endoplasmic reticulum, plasma membrane 59.42 50.24
CDY08584 Canola cytosol 55.58 50.17
CDY11313 Canola cytosol 56.73 50.17
CDY00688 Canola plastid 56.15 48.67
CDX73914 Canola plastid 55.77 48.41
CDY07688 Canola cytosol 50.38 47.64
CDY14419 Canola cytosol 50.38 47.64
CDY32077 Canola cytosol 41.92 42.08
CDX88038 Canola cytosol 52.31 30.09
CDY00689 Canola plastid 0.38 0.6
CDY00964 Canola plastid 0.38 0.6
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20GO:A0A078E5H6EnsemblPlants:CDX97315
ProteinID:CDX97315ProteinID:CDX97315.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005509GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00104378001InterPro:IPR000719InterPro:IPR002048
InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF174InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00054SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0002548114
Description
BnaA02g21060D
Coordinates
chrLK031898:+:866096..868999
Molecular Weight (calculated)
58662.2 Da
IEP (calculated)
6.574
GRAVY (calculated)
-0.463
Length
520 amino acids
Sequence
(BLAST)
001: MGCLSSKHRQ EETAAKPSTP ITPAQTHVVP EHRKPQTPPT HHQISAPPAT VRDPDTILGK PFEDIRKFYS LGKELGRGQF GITYRCREIS TGNTYACKSI
101: LKRKLISKQD KEDVKREIQI MQYLSGQANI VEIKGAYEDR QSVHLVMELC AGGELFDRII AQGHYSERAA AGIIRSIVNV VQICHFMGVV HRDLKPENFL
201: LSSKEENAML KATDFGLSVF IEEGKVYRDI VGSAYYVAPE VLRRSYGKEI DIWSAGVILY ILLSGVPPFW AENEKGIFDE VVKGEIDFES QPWPSISESA
301: KDLVRKMLTK DPRRRITAAQ VLEHPWIKGG EAPDKPIDSA VLSRMKQFRA MNKLKKLALK VIAESLSEEE IKGLKTMFAN MDTDKSGTIT YEELKTGLTR
401: LGSKLSETEV KQLMEAADVD GNGTIDYFEF ISATMHRYKL DRDEHVYKAF QHFDKDNSGH ITRDELESAM KEYGMGDEAS IKEVISEVDT DNDGRINFEE
501: FCAMMRSGTT QPQGKLLPFH
Best Arabidopsis Sequence Match ( AT4G04720.1 )
(BLAST)
001: MGCFSSKHRK TQNDGGEKSI PINPVQTHVV PEHRKPQTPT PKPMTQPIHQ QISTPSSNPV SVRDPDTILG KPFEDIRKFY SLGKELGRGQ FGITYMCKEI
101: GTGNTYACKS ILKRKLISKQ DKEDVKREIQ IMQYLSGQPN IVEIKGAYED RQSIHLVMEL CAGGELFDRI IAQGHYSERA AAGIIRSIVN VVQICHFMGV
201: VHRDLKPENF LLSSKEENAM LKATDFGLSV FIEEGKVYRD IVGSAYYVAP EVLRRSYGKE IDIWSAGVIL YILLSGVPPF WAENEKGIFD EVIKGEIDFV
301: SEPWPSISES AKDLVRKMLT KDPKRRITAA QVLEHPWIKG GEAPDKPIDS AVLSRMKQFR AMNKLKKLAL KVIAESLSEE EIKGLKTMFA NIDTDKSGTI
401: TYEELKTGLT RLGSRLSETE VKQLMEAADV DGNGTIDYYE FISATMHRYK LDRDEHVYKA FQHFDKDNSG HITRDELESA MKEYGMGDEA SIKEVISEVD
501: TDNDGRINFE EFCAMMRSGS TQPQGKLLPF H
Arabidopsis Description
CPK21Calcium-dependent protein kinase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.