Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G428400.2 | Wheat | cytosol | 99.2 | 98.72 |
| TraesCS5A01G426500.1 | Wheat | cytosol | 98.72 | 98.25 |
| Os03t0788500-01 | Rice | cytosol | 83.49 | 86.98 |
| EER93328 | Sorghum | cytosol | 83.49 | 84.44 |
| Zm00001d034372_P001 | Maize | cytosol | 81.73 | 83.33 |
| GSMUA_Achr7P07810_001 | Banana | cytosol, plastid | 64.26 | 79.72 |
| Zm00001d013109_P002 | Maize | plasma membrane | 78.37 | 78.87 |
| VIT_13s0175g00080.t01 | Wine grape | cytosol, plastid | 70.19 | 76.98 |
| Solyc11g006370.1.1 | Tomato | plastid | 70.51 | 76.12 |
| PGSC0003DMT400002592 | Potato | plastid | 70.35 | 75.95 |
| Solyc04g009800.2.1 | Tomato | cytosol, plastid | 69.55 | 74.7 |
| PGSC0003DMT400065419 | Potato | plastid | 69.23 | 74.35 |
| KRG90147 | Soybean | cytosol, plastid | 68.11 | 73.4 |
| CDX70192 | Canola | cytosol, plastid | 66.99 | 73.08 |
| CDX98791 | Canola | cytosol, plastid | 66.99 | 72.95 |
| CDX80925 | Canola | cytosol | 66.83 | 72.77 |
| KRH33395 | Soybean | endoplasmic reticulum, nucleus | 67.63 | 72.63 |
| TraesCS2D01G249900.2 | Wheat | cytosol, plastid | 64.58 | 71.71 |
| CDY11313 | Canola | cytosol | 67.47 | 71.6 |
| CDY08584 | Canola | cytosol | 65.87 | 71.35 |
| CDY00963 | Canola | plastid | 65.54 | 71.25 |
| Bra009420.1-P | Field mustard | cytosol, plastid | 67.47 | 71.24 |
| Solyc10g081740.1.1 | Tomato | cytosol | 56.89 | 71.14 |
| KRH72128 | Soybean | plastid | 66.67 | 70.87 |
| VIT_08s0032g01220.t01 | Wine grape | cytosol | 65.87 | 70.86 |
| AT5G04870.1 | Thale cress | cytosol, plastid | 68.43 | 70.0 |
| Bra005824.1-P | Field mustard | cytosol, plastid | 67.63 | 69.64 |
| CDX73914 | Canola | plastid | 65.87 | 68.61 |
| CDY00688 | Canola | plastid | 65.54 | 68.17 |
| TraesCS5D01G124000.1 | Wheat | plastid | 67.63 | 67.63 |
| PGSC0003DMT400054983 | Potato | cytosol | 63.14 | 65.89 |
| Solyc01g006840.2.1 | Tomato | cytosol | 62.98 | 65.72 |
| TraesCS4D01G107200.1 | Wheat | plastid | 54.01 | 65.56 |
| TraesCS5D01G434800.2 | Wheat | cytosol | 63.3 | 64.75 |
| KRH68038 | Soybean | cytosol | 61.22 | 64.75 |
| AT3G10660.1 | Thale cress | cytosol, plastid | 66.83 | 64.55 |
| TraesCS5D01G122800.1 | Wheat | cytosol | 54.49 | 64.27 |
| TraesCS1D01G433400.1 | Wheat | cytosol, golgi | 46.79 | 63.48 |
| KRG96293 | Soybean | cytosol | 60.1 | 63.24 |
| PGSC0003DMT400072554 | Potato | cytosol | 61.22 | 62.93 |
| TraesCS6D01G242000.2 | Wheat | mitochondrion | 55.13 | 62.77 |
| TraesCS2D01G456400.1 | Wheat | cytosol, mitochondrion | 55.93 | 62.77 |
| TraesCS6D01G404800.1 | Wheat | cytosol | 53.04 | 59.0 |
| TraesCS3D01G228700.1 | Wheat | cytosol, mitochondrion | 48.4 | 58.3 |
| TraesCS4D01G125500.1 | Wheat | cytosol | 49.68 | 58.27 |
| TraesCS3D01G327700.3 | Wheat | plastid | 48.4 | 58.08 |
| TraesCS1D01G308800.1 | Wheat | plastid | 47.92 | 57.83 |
| TraesCS4D01G318400.2 | Wheat | cytosol | 49.68 | 56.57 |
| TraesCS2D01G229100.2 | Wheat | cytosol | 49.04 | 56.56 |
| TraesCS5D01G153800.1 | Wheat | cytosol | 48.08 | 55.45 |
| TraesCS2D01G404200.1 | Wheat | cytosol | 46.96 | 54.87 |
| Bra029859.1-P | Field mustard | plastid | 66.03 | 43.37 |
| Bra001373.1-P | Field mustard | plastid | 66.99 | 43.09 |
| CDY00964 | Canola | plastid | 0.48 | 0.9 |
| CDY00689 | Canola | plastid | 0.32 | 0.6 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.4 | Gene3D:3.30.200.20 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR002048 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF13499 | ScanProsite:PS00018 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS50222 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF164 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00054 | SMART:SM00220 | SUPFAM:SSF47473 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5D01G434500 |
| EnsemblPlants:TraesCS5D01G434500.2 | TIGR:cd00051 | TIGR:cd05117 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5D:+:489905418..489908458
Molecular Weight (calculated)
68225.7 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.303
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNTCVGPSI GKNGFFHSVS TVLWTRRPDG EALPPANGGV ADRAPPPDAP LAVHIVSKAP EPVKIASGTA NAKPDEAAQP KPKAKPPAHP KPAAPAAAKE
101: QESKASTDSS SSSGSGGEAK PPHHRPKVPP VKRVSSAGLL VGSVLKRKTE SVKEKYSLGR RLGQGQFGTT YLCVERSSGK EYACKSILKR KLVTDDDVED
201: VRREIQIMYH LAGHPNVISI RGAYEDAVAV HLVMELCAGG ELFDRIVQKG HYTERKAAEL ARVIVGVVEV CHSMGVMHRD LKPENFLFVD QTEEAALKTI
301: DFGLSVFFRP GQIFTDVVGS PYYVAPEVLK KKYGPEADVW SAGVIIYILL CGVPPFWAEN EQGIFEEVLH GKLDFESDPW PSISEGAKDL VRRMLLRDPK
401: KRLTAHEVLR HPWVQVGGLA PDKPLDSAVL SRMKQFSAMN KLKKMALRVI AENLSEDEIA GLKEMFKMID SDNSGQITYE ELKVGLKKVG ANLQESEIYA
501: LMQAADVDKS GTIDYGEFIA ATLHLNKVER EDHLFAAFQY FDKDGSGYIT PDELQLACEE FGLGSDDLSL DNMIREVDQD NDGRIDYNEF VAMMQKPALG
601: LAKKAGAGLE SSFSIGFREA LRMA
101: QESKASTDSS SSSGSGGEAK PPHHRPKVPP VKRVSSAGLL VGSVLKRKTE SVKEKYSLGR RLGQGQFGTT YLCVERSSGK EYACKSILKR KLVTDDDVED
201: VRREIQIMYH LAGHPNVISI RGAYEDAVAV HLVMELCAGG ELFDRIVQKG HYTERKAAEL ARVIVGVVEV CHSMGVMHRD LKPENFLFVD QTEEAALKTI
301: DFGLSVFFRP GQIFTDVVGS PYYVAPEVLK KKYGPEADVW SAGVIIYILL CGVPPFWAEN EQGIFEEVLH GKLDFESDPW PSISEGAKDL VRRMLLRDPK
401: KRLTAHEVLR HPWVQVGGLA PDKPLDSAVL SRMKQFSAMN KLKKMALRVI AENLSEDEIA GLKEMFKMID SDNSGQITYE ELKVGLKKVG ANLQESEIYA
501: LMQAADVDKS GTIDYGEFIA ATLHLNKVER EDHLFAAFQY FDKDGSGYIT PDELQLACEE FGLGSDDLSL DNMIREVDQD NDGRIDYNEF VAMMQKPALG
601: LAKKAGAGLE SSFSIGFREA LRMA
001: MGNTCVGPSR NGFLQSVSAA MWRPRDGDDS ASMSNGDIAS EAVSGELRSR LSDEVQNKPP EQVTMPKPGT DVETKDREIR TESKPETLEE ISLESKPETK
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL
Arabidopsis Description
CPK1CPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQJ5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.