Factsheet for TraesCS6D01G242000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G288600.1	Wheat	mitochondrion	99.64	99.64
TraesCS6A01G261200.1	Wheat	mitochondrion	99.82	99.45
Zm00001d051502_P004	Maize	mitochondrion	91.24	88.97
OQU85618	Sorghum	mitochondrion	91.24	88.5
HORVU6Hr1G066470.15	Barley	cytosol	91.61	88.38
TraesCS2D01G456400.1	Wheat	cytosol, mitochondrion	86.5	85.25
CDY47496	Canola	cytosol	73.36	83.92
CDY59100	Canola	cytosol	71.35	81.29
CDY54794	Canola	cytosol	71.35	81.29
CDX69129	Canola	nucleus, plasma membrane	77.01	77.57
CDX87997	Canola	cytosol	76.28	77.55
CDY07866	Canola	cytosol	76.28	77.55
CDX75493	Canola	cytosol	77.01	77.43
Bra009653.1-P	Field mustard	cytosol	76.09	77.37
Solyc01g112250.2.1	Tomato	cytosol	75.36	77.34
AT2G17290.2	Thale cress	cytosol	76.28	76.84
AT4G38230.2	Thale cress	cytosol	71.72	76.46
CDX72530	Canola	cytosol	69.53	76.2
KRH74107	Soybean	cytosol	76.28	76.14
CDY26800	Canola	cytosol	75.73	75.73
AT4G35310.1	Thale cress	cytosol	76.82	75.72
KRH14008	Soybean	cytosol	76.28	74.91
Bra037277.1-P	Field mustard	cytosol	75.18	74.77
Solyc10g074570.1.1	Tomato	cytosol, plastid	75.73	74.51
CDY52603	Canola	cytosol	59.85	73.38
PGSC0003DMT400043320	Potato	cytosol, plastid	75.91	73.37
VIT_03s0038g03960.t01	Wine grape	cytosol	77.55	70.36
TraesCS6D01G404800.1	Wheat	cytosol	68.98	67.38
TraesCS1D01G433400.1	Wheat	cytosol, golgi	54.56	65.0
TraesCS4D01G107200.1	Wheat	plastid	60.22	64.2
TraesCS5D01G122800.1	Wheat	cytosol	60.22	62.38
TraesCS4D01G318400.2	Wheat	cytosol	61.86	61.86
TraesCS2D01G249900.2	Wheat	cytosol, plastid	62.23	60.68
TraesCS5D01G434800.2	Wheat	cytosol	63.69	57.21
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	53.83	56.95
TraesCS3D01G327700.3	Wheat	plastid	53.83	56.73
TraesCS4D01G125500.1	Wheat	cytosol	54.01	55.64
TraesCS1D01G308800.1	Wheat	plastid	52.19	55.32
TraesCS5D01G434500.2	Wheat	cytosol	62.77	55.13
TraesCS5D01G124000.1	Wheat	plastid	62.59	54.97
TraesCS5D01G153800.1	Wheat	cytosol	53.28	53.97
TraesCS2D01G404200.1	Wheat	cytosol	52.37	53.75
TraesCS2D01G229100.2	Wheat	cytosol	52.92	53.6
Bra033557.1-P	Field mustard	endoplasmic reticulum	72.45	44.36

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF248	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6D01G242000
EnsemblPlants:TraesCS6D01G242000.2	TIGR:cd00051	TIGR:cd05117	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:+:344207636..344211829

Molecular Weight (calculated)

60517.2 Da

IEP (calculated)

5.285

GRAVY (calculated)

-0.265

Length

548 amino acids

Sequence
(BLAST)

001: MGNTCGVTFR SKYFSSFRGA PQRHDSGYAP VAAADADADS PPGKRPSRPA AVADAAAPPP AAGMRRGSLA PAELTANVLG HPTPSLHDHY LLGRKLGQGQ
101: FGTTYLCTDR ATGADYACKS IGKRKLITKE DVEDVRREIQ IMHHLAGHRN VVAIKGAYED QVYVHIVMEL CGGGELFDRI IQRGHYSERK AAELTRIVVG
201: VVEACHSLGV IHRDLKPENF LLANKDDDMS LKAIDFGLSV FFKPGQVFTD VVGSPYYVAP EVLRKRYGPE ADVWTAGVIL YILLSGVPPF WAETQQGIFD
301: AVLKGVIDFD SDPWPVISDS AKDLIMRMLN PRPAERLTAH EVLCHPWICD HGVAPDRPLD PAVLSRIKQF SAMNKLKKMA LRVIAESLSE EEIAGLKEMF
401: EAMDTDNSGA ITYDELKEGM RKYGSTLKDT EIRDLMEAAD VDNSGTIDYI EFIAATLHLN KLEREEHLVA AFSYFDKDGS GYITVDELQQ ACKEHNMPDA
501: FLDDVIIEAD QDNDGRIDYG EFVAMMTKGN MGVGRRTMRN SLNISMTE

Best Arabidopsis Sequence Match ( AT2G17290.1 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.