Factsheet for PGSC0003DMT400071663

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 14558661

gfp PMID: 14558661 doi

M Raíces, PR Gargantini, D Chinchilla, M Crespi, MT Téllez-Iñón, RM Ulloa

Instituto de Investigaciones en Ingeniería Genética y Biología Molecular, CONICET and Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Vuelta de Obligado 2490 2do piso, 1428 Buenos Aires, Argentina.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g005040.1.1	Tomato	cytosol	19.84	98.06
PGSC0003DMT400057484	Potato	cytosol	84.68	82.73
KRH73749	Soybean	nucleus	77.41	74.62
VIT_19s0090g00410.t01	Wine grape	cytosol	78.0	74.07
KRH14398	Soybean	cytosol, nucleus	77.8	73.47
CDY36037	Canola	nucleus, plasma membrane	75.44	72.32
KXG36322	Sorghum	cytosol	75.25	72.13
GSMUA_Achr6P29450_001	Banana	cytosol	66.6	72.13
CDX82244	Canola	cytosol	75.64	72.1
Zm00001d021623_P001	Maize	plasma membrane	75.05	71.94
TraesCS2B01G248700.2	Wheat	cytosol	75.05	71.8
TraesCS2A01G223100.2	Wheat	cytosol	75.05	71.8
KRH46181	Soybean	nucleus	77.6	71.69
Zm00001d006479_P005	Maize	plasma membrane	74.66	71.56
KRG98764	Soybean	cytosol	77.41	71.51
Os07t0515100-01	Rice	cytosol	74.66	71.29
Bra001789.1-P	Field mustard	cytosol	75.83	71.22
AT1G50700.2	Thale cress	cytosol	73.87	68.74
TraesCS2D01G229100.2	Wheat	cytosol	72.69	68.39
HORVU2Hr1G046660.1	Barley	cytosol	72.69	68.39
CDY43077	Canola	cytosol	67.78	66.09
PGSC0003DMT400025581	Potato	cytosol	66.21	62.41
PGSC0003DMT400014939	Potato	plastid	62.08	61.12
PGSC0003DMT400011823	Potato	cytosol	63.46	60.37
PGSC0003DMT400024436	Potato	cytosol	61.3	59.54
PGSC0003DMT400067082	Potato	cytosol, plastid	56.78	57.68
PGSC0003DMT400002331	Potato	cytosol	56.39	56.83
GSMUA_Achr2P13980_001	Banana	plasma membrane	69.55	56.37
PGSC0003DMT400060262	Potato	cytosol	54.81	55.47
PGSC0003DMT400002592	Potato	plastid	59.14	52.08
PGSC0003DMT400018575	Potato	cytosol	53.63	50.18
PGSC0003DMT400043320	Potato	cytosol, plastid	55.8	50.09
PGSC0003DMT400065419	Potato	plastid	56.78	49.74
PGSC0003DMT400054991	Potato	cytosol	54.42	47.59
PGSC0003DMT400054983	Potato	cytosol	55.8	47.49
PGSC0003DMT400072554	Potato	cytosol	55.99	46.95
PGSC0003DMT400072292	Potato	cytosol, plastid	55.21	44.04

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	ProteinID:AAD28192	ProteinID:AAD28192.2
ProteinID:ABF56558	ProteinID:ABF56558.1	ProteinID:ACZ26302	ProteinID:ACZ26302.1	EMBL:AF115406	ncoils:Coil
EMBL:DQ507862	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	EMBL:GU160404	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
UniProt:M1CP44	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400027877	PGSC:PGSC0003DMG400027877	EnsemblPlants:PGSC0003DMT400071663
ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF177	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029521B4	:	:	:

Description

Calcium dependant protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400027877]

Coordinates

chr12:+:9046407..9053551

Molecular Weight (calculated)

56629.0 Da

IEP (calculated)

6.458

GRAVY (calculated)

-0.338

Length

509 amino acids

Sequence
(BLAST)

001: MGVCLSKSKP AESKSDGHYR SGGSDGGPET QLPLRPQASP KPVFKQETIL GKAFEDVKAH YTLGKELGRG QFGVTFLCTE IATGHQYACK SISKKKLVTK
101: SDKADMRREI QIMQHLSGQP NIVAFKGAYE DMNSVCLVME LCAGGELFDR IIAKGHYTER AAASMCRAIV NVVHVCHFMG VMHRDLKPEN FLLSDKSENA
201: ALKATDFGLS MFIEEGKVYK DIVGSAYYVA PEVLRKSYGK EIDVWSAGVM LYILLSGVPP FWAETERGIF DAILKEDIDF ESQPWPSITS SAKDLVRKML
301: NKDPKQRISA AQVLEHPWLK VGGVASDKPL DNAVLSRMKQ FRAMNKLKRL ALKVIAENLS ADEILGLKSM FHNIDTDNSG TITYEELKSG LARLGSKLTE
401: AEVKQLMEAA DVDGNGSIDY IEFITATMHK HRLERDENLY KAFQYFDKDG SGFITRDELE TSMEEHGIGD PASIREIISE VDADNDGRIN YEEFCTMMRS
501: GAKQPGKLF

Best Arabidopsis Sequence Match ( AT3G20410.1 )
(BLAST)

001: MGNCFAKNHG LMKPQQNGNT TRSVEVGVTN QDPPSYTPQA RTTQQPEKPG SVNSQPPPWR AAAAAPGLSP KTTTKSNSIL ENAFEDVKLF YTLGKELGRG
101: QFGVTYLCTE NSTGKKYACK SISKKKLVTK ADKDDMRREI QIMQHLSGQP NIVEFKGAYE DEKAVNLVME LCAGGELFDR IIAKGHYTER AAASVCRQIV
201: NVVKICHFMG VLHRDLKPEN FLLSSKDEKA LIKATDFGLS VFIEEGKVYR DIVGSAYYVA PEVLRRRYGK EVDIWSAGII LYILLSGVPP FWAETEKGIF
301: DAILEGHIDF ESQPWPSISS SAKDLVRRML TADPKRRISA ADVLQHPWLR EGGEASDKPI DSAVLSRMKQ FRAMNKLKKL ALKVIAENID TEEIQGLKAM
401: FANIDTDNSG TITYEELKEG LAKLGSKLTE AEVKQLMDAA DVDGNGSIDY IEFITATMHR HRLESNENLY KAFQHFDKDS SGYITIDELE SALKEYGMGD
501: DATIKEVLSD VDSDNDGRIN YEEFCAMMRS GNPQQQQPRL F

Arabidopsis Description

CPK9Calcium-dependent protein kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q38868]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.