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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
PProwler:secretory
YLoc:cytosol
 plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0226600-02
Os01t0385400-01
Os01t0623200-01
Os05t0219900-01
Os07t0181100-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38910.1 Os01t0226600-02 AT5G24030.1 24280384
AT2G38910.1 Os01t0385400-01 AT5G24030.1 24280384
AT2G38910.1 Os01t0623200-01 AT5G24030.1 24280384
AT2G38910.1 Os05t0219900-01 AT5G24030.1 24280384
AT2G38910.1 Os07t0181100-01 AT5G24030.1 24280384
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P25890_001 Banana plastid 61.63 75.94
Zm00001d034376_P001 Maize plastid 74.53 75.69
EER90764 Sorghum plastid 74.87 75.38
Zm00001d013105_P004 Maize cytosol, plastid 74.53 75.17
TraesCS5B01G428700.1 Wheat cytosol 72.67 73.04
Os07t0161600-01 Rice plasma membrane 70.29 72.89
TraesCS5D01G434800.2 Wheat cytosol 72.84 70.33
TraesCS5A01G426800.2 Wheat cytosol 72.67 70.16
VIT_08s0032g00780.t01 Wine grape cytosol 65.36 67.78
PGSC0003DMT400018575 Potato cytosol 62.31 67.46
Os11t0171500-01 Rice plasma membrane 58.23 66.86
Solyc10g076900.1.1 Tomato cytosol 56.2 66.07
CDY07688 Canola cytosol 60.1 64.36
CDY14419 Canola cytosol 60.1 64.36
Bra000105.1-P Field mustard cytosol 61.8 64.31
PGSC0003DMT400054991 Potato cytosol 63.5 64.26
Os12t0169800-00 Rice plasma membrane 57.05 63.88
Solyc01g006730.2.1 Tomato cytosol 62.99 63.75
AT2G38910.1 Thale cress cytosol, plastid 62.82 63.46
Solyc10g081640.1.1 Tomato cytosol 62.31 63.39
Os04t0584600-02 Rice mitochondrion 58.91 62.98
Os03t0788500-01 Rice cytosol 63.33 62.27
KRH32931 Soybean plastid 62.82 62.18
Os02t0832000-01 Rice plasma membrane 56.03 60.55
Os01t0622600-01 Rice plasma membrane 50.93 57.92
PGSC0003DMT400072292 Potato cytosol, plastid 62.48 57.68
Os01t0808400-01 Rice plasma membrane 49.41 56.5
Os05t0585500-01 Rice plasma membrane 50.76 55.17
Os07t0515100-01 Rice cytosol 47.88 52.91
Os11t0136600-00 Rice extracellular 48.56 52.87
Os10t0539600-01 Rice nucleus 47.54 52.43
Os04t0560600-01 Rice plasma membrane 45.33 50.09
Os12t0486600-00 Rice plasma membrane 64.86 49.55
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016020GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777GO:GO:0046872
InterPro:IPR000719InterPro:IPR002048InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os03g0789000EnsemblPlants:Os03t0789000-00PFAM:PF00069
PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222
PANTHER:PTHR24349PANTHER:PTHR24349:SF81InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220
SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000393C03DSEG:seg:
Description
CALCIUM-DEPENDENT PROTEIN KINASE 11Similar to Calcium-dependent protein kinase. (Os03t0789000-00)
Coordinates
chr3:-:32791645..32798572
Molecular Weight (calculated)
66729.0 Da
IEP (calculated)
6.942
GRAVY (calculated)
-0.416
Length
589 amino acids
Sequence
(BLAST)
001: AVHYTIIPSY ILDEFYVNSR FDLEQGAELL DGLHGVRGED EARRQQHAGG HHRRRHRRRL RRRRRRGLAL AEGEEQRVAA GAACCRRALL DHRRRVVRRH
101: HHRRRRRWLA RQPLHDGHEL LRPRVHHLGR KLGQGQFGTT YLCVEKATGR EFACKSIAKR KLLTQEDVED VRREIQIMHH LAGHANVVSI VGAYEDAVAV
201: QLVMELCAGG ELFDRIIQRG HYSEKAAAQL ARVIVGVIEA CHSLGVMHRD LKPENFLFIH QKEDSPLKAI DFGLSIFFKP GETFTDVVGS PYYVAPEVLM
301: KHYGREVDVW SAGVIIYILL SGVPPFWDES EQGIFEQVLK GDLDFSSEPW PNISESAKDL VRKMLIRDPK KRLTAHEALC HPWVCVDGVA PDKPLDSAVL
401: SRLKQFSAMN KLKKMALRVI AESLSEEEIA GLKEMFKMLD TDNSGHITLE ELKTGLQRVG ANLMDSEIDA LMEAADIDNS GTIDYGEFIA ATLHINKVEK
501: EDKLFAAFSY FDKDGSGYIT QDELQKACEE FGIGDTRIED IIGDIDQDND GRIDYNEFVE MMQKGNNAMG KMGQHSTGNF GLGEALKLR
Best Arabidopsis Sequence Match ( AT5G04870.1 )
(BLAST)
001: MGNTCVGPSR NGFLQSVSAA MWRPRDGDDS ASMSNGDIAS EAVSGELRSR LSDEVQNKPP EQVTMPKPGT DVETKDREIR TESKPETLEE ISLESKPETK
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL
Arabidopsis Description
CPK1CPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQJ5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.