Factsheet for Os10t0539600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

nucleus: 15276429

msms PMID: 15276429 doi

MM Khan, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94580	Sorghum	cytosol	69.29	68.77
Zm00001d029758_P004	Maize	cytosol	67.42	66.67
Os04t0584600-02	Rice	mitochondrion	62.36	60.44
Os02t0832000-01	Rice	plasma membrane	56.55	55.41
Os11t0171500-01	Rice	plasma membrane	52.62	54.78
Os12t0169800-00	Rice	plasma membrane	52.43	53.23
Os01t0808400-01	Rice	plasma membrane	49.06	50.87
Os07t0161600-01	Rice	plasma membrane	53.56	50.35
Os03t0788500-01	Rice	cytosol	55.24	49.25
Os01t0622600-01	Rice	plasma membrane	47.38	48.84
Os11t0136600-00	Rice	extracellular	48.69	48.06
Os03t0789000-00	Rice	cytosol, plasma membrane	52.43	47.54
Os07t0515100-01	Rice	cytosol	46.82	46.9
Os05t0585500-01	Rice	plasma membrane	47.57	46.86
Os04t0560600-01	Rice	plasma membrane	44.38	44.47
Os12t0486600-00	Rice	plasma membrane	53.0	36.71

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	EntrezGene:4349249	ProteinID:AAG46110.1
ProteinID:AAP54840.1	EMBL:AK065456	ProteinID:BAF27094.1	ProteinID:BAT11850.1	EMBL:D13436	InterPro:EF-hand-dom_pair
EMBL:EF122475	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0010857
GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
GO:GO:0035556	GO:GO:0046777	GO:GO:0046872	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
EnsemblPlantsGene:Os10g0539600	EnsemblPlants:Os10t0539600-01	UniProt:P53682	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF119
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000A9F98	RefSeq:XP_015614491.1	SEG:seg	:	:

Description

SPREADING STUBSimilar to Calcium-dependent protein kinase 3. (Os10t0539600-01)

Coordinates

chr10:+:21027467..21032216

Molecular Weight (calculated)

60550.2 Da

IEP (calculated)

5.572

GRAVY (calculated)

-0.365

Length

534 amino acids

Sequence
(BLAST)

001: MGNSCQNGTY GNNYQNSNRF QNDRFASRYV DGNDTEDCYS GSSRASLAGA LRQGLNLKSP VLGYKTPNVR ELYTLGRELG QGQFGKTYLC TEISTGCQYA
101: CKTILKSNLR CVSDIEDVRR EIQIMHHLSG QKNIVTIKDT YEDEQAVHIV MELCAGGELF SKIQKRGHYS ERKAAELIKI IVGIIETCHS HGVMHRDLKP
201: ENFLLLDADD EFSVKAIDFG LSVFFRPGQV FREVVGSPYY IAPEVLEKRY GPEADIWTAG VILYVLLTGV PPFWADTQSG IYEKVLDGRI DFKSNRWPRI
301: SDSAKDLIKK MLCPYPSERL KAHEVLKHPW ICDNGVATNR ALDPSVLPRL KQFSAMNRLK KLSLQIIAER LSEEEIVGLR EMFKAMDTKN RSVVTFGELK
401: GLKRYSSVFK DTEINDLMEA ADDTTSTINW EEFIAAAVSL NKIEREKHLM AAFTYFDKDG SGFITVDKLQ KACMERNMED TFLEEMILEV DQNNDGQIDY
501: AEFVTMMQSN NFGLGWQTVE SSLNVALREA PQVY

Best Arabidopsis Sequence Match ( AT2G17290.1 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.