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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 5
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G23650.1 KRG89812 AT2G41090.1 17360592
AT4G23650.1 KRG94975 AT2G41090.1 17360592
AT4G23650.1 KRH18664 AT2G41090.1 17360592
AT4G23650.1 KRG89812 AT2G41100.1 17360592
AT4G23650.1 KRG94975 AT2G41100.1 17360592
AT4G23650.1 KRH18664 AT2G41100.1 17360592
AT4G23650.1 KRH31638 AT4G14640.1 17360592
AT4G23650.1 KRH69070 AT4G14640.1 17360592
AT4G23650.1 KRG89812 AT5G21274.1 17360592
AT4G23650.1 KRG94975 AT5G21274.1 17360592
AT4G23650.1 KRH18664 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH27875 Soybean nucleus 92.42 96.63
KRH59992 Soybean endoplasmic reticulum 84.09 85.71
VIT_02s0025g00690.t01 Wine grape cytosol 82.2 82.2
GSMUA_Achr6P31900_001 Banana mitochondrion 67.05 81.19
CDY10955 Canola cytosol 57.58 80.85
Solyc08g008170.2.1 Tomato plastid 78.6 80.43
Bra019282.1-P Field mustard cytosol 57.2 80.32
PGSC0003DMT400014939 Potato plastid 78.22 79.88
TraesCS1A01G424200.1 Wheat cytosol 68.94 79.13
TraesCS1B01G456700.1 Wheat cytosol 68.94 79.13
TraesCS1D01G433400.1 Wheat cytosol, golgi 68.94 79.13
HORVU1Hr1G092710.1 Barley cytosol, plasma membrane 70.64 77.71
Os01t0622600-01 Rice plasma membrane 74.62 76.06
GSMUA_Achr9P05370_001 Banana cytosol 64.02 75.78
GSMUA_Achr2P06360_001 Banana plasma membrane 73.86 75.58
TraesCS3B01G254500.1 Wheat golgi, unclear 73.3 74.71
TraesCS3A01G224900.1 Wheat cytosol, mitochondrion 73.3 74.71
TraesCS3D01G228700.1 Wheat cytosol, mitochondrion 73.3 74.71
AT4G23650.1 Thale cress plastid 74.62 74.48
EES01094 Sorghum cytosol, mitochondrion 74.05 74.48
CDY54853 Canola plastid 74.05 74.48
Bra013719.1-P Field mustard cytosol, plastid 73.86 74.29
CDY44125 Canola cytosol, plastid 73.67 74.1
Bra019284.1-P Field mustard plastid 74.62 74.06
Bra019281.1-P Field mustard plastid 74.62 74.06
Zm00001d044185_P005 Maize cytosol, mitochondrion 73.11 73.66
Zm00001d011392_P001 Maize cytosol, plastid 73.67 73.4
GSMUA_Achr1P05040_001 Banana cytosol 65.15 72.57
Zm00001d009708_P001 Maize mitochondrion 74.05 72.54
EES20022 Sorghum cytosol, mitochondrion 73.67 71.9
Os05t0585500-01 Rice plasma membrane 73.11 71.22
KRH41261 Soybean cytosol 57.39 69.34
KRH50623 Soybean cytosol 67.99 66.36
KRG89696 Soybean cytosol, mitochondrion 68.56 66.3
KRH73535 Soybean cytosol 65.72 65.84
KRH14593 Soybean cytosol 65.91 65.78
HORVU3Hr1G055730.3 Barley plastid 73.86 65.66
CDY62741 Canola endoplasmic reticulum, plasma membrane 75.0 64.39
KRH73749 Soybean nucleus 64.2 64.2
KRH14398 Soybean cytosol, nucleus 64.58 63.27
KRH51083 Soybean endoplasmic reticulum 61.93 61.81
KRH02072 Soybean endoplasmic reticulum, nucleus 62.88 61.71
KRH46181 Soybean nucleus 63.26 60.62
KRG98764 Soybean cytosol 62.69 60.07
KRH17481 Soybean cytosol 60.04 59.03
KRG91803 Soybean mitochondrion 54.55 58.78
KRH34984 Soybean cytosol 54.73 58.74
KRH54032 Soybean cytosol 54.92 58.35
KRH63919 Soybean cytosol 54.55 58.06
KRH05995 Soybean cytosol 55.49 57.12
KRH41022 Soybean plastid 54.55 56.69
KRH59698 Soybean plastid 54.36 56.61
KRH34983 Soybean cytosol 51.52 56.43
KRH74107 Soybean cytosol 57.95 55.74
KRH05994 Soybean cytosol 56.25 55.41
KRH14008 Soybean cytosol 57.77 54.66
KRG90147 Soybean cytosol, plastid 59.47 54.23
KRH33395 Soybean endoplasmic reticulum, nucleus 58.9 53.53
KRH72128 Soybean plastid 55.87 50.26
KRH68038 Soybean cytosol 55.11 49.32
KRH32931 Soybean plastid 55.49 49.24
KRG96293 Soybean cytosol 54.73 48.74
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20UniProt:A0A0R0LNW3EMBL:ACUP02000680
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domEnsemblPlantsGene:GLYMA_01G223200GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515
GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777InterPro:IPR000719
InterPro:IPR002048EnsemblPlants:KRH77599ProteinID:KRH77599ProteinID:KRH77599.1InterPro:Kinase-like_dom_sfPFAM:PF00069
PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222
PANTHER:PTHR24349PANTHER:PTHR24349:SF182InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220
SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0003DED87B::
Description
hypothetical protein
Coordinates
chr1:-:55204288..55209545
Molecular Weight (calculated)
59894.6 Da
IEP (calculated)
7.161
GRAVY (calculated)
-0.528
Length
528 amino acids
Sequence
(BLAST)
001: MVSRFSPDRV NTKKQQRSND TVSMGNCNSE ASSQTQPHSD HHPQPRSNSN GITVLPPNSK PSVGRVLGRP MEDVRSTYTF GRELGRGQFG VTYLVTHKHT
101: KQQFACKSIA TPKLVHRDDL EDVRREVQIM HHLTGHRNIV ELKGAYEDRH SVNLIMELCG GGELFDRIIA KGHYSERAAA DLCRQIVTVV HDCHTMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDVFKDLV GSAYYVAPEV LRRSYGPEAD IWSAGVILFI LLSGVPPFWS KKEQGIFDAI LRGHIDFTSD
301: PWPSISSSAK DLVKKMLRAD PKQRLSAVEV LDHPWMREDG ASDKPLDVAV LSRMKQFRAM NKLKKVALKV IAENLSEEEI IGLKEMFKSM DTDNSGTITF
401: EELKAGLPKL GTKVSESEVR QLMEAADVDG NGTIDYIEFI TATMHMNRME REDHLYKAFE YFDKDRSGYI TMEELESTLK KYNMGDEKTI KEIIVEVDTD
501: NDGRINYDEF VAMMRKGKPD LVTNRRRK
Best Arabidopsis Sequence Match ( AT4G23650.1 )
(BLAST)
001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM
Arabidopsis Description
CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.