Factsheet for Os09t0298100-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0264500-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	Os01t0267900-01	AT2G41100.1	17360592
AT1G20950.1	Os01t0279300-01	AT2G41100.1	17360592
AT1G20950.1	Os01t0810300-01	AT2G41100.1	17360592
AT1G20950.1	Os03t0319300-01	AT2G41100.1	17360592
AT1G20950.1	Os05t0491000-01	AT2G41100.1	17360592
AT1G20950.1	Os05t0491100-01	AT2G41100.1	17360592
AT1G20950.1	Os07t0687200-02	AT2G41100.1	17360592
AT1G20950.1	Os12t0603800-00	AT2G41100.1	17360592
AT1G20950.1	Os03t0743500-02	AT4G14640.1	17360592
AT1G20950.1	Os12t0264500-02	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35340	Sorghum	cytosol	79.68	78.29
Zm00001d020006_P001	Maize	cytosol	67.58	77.02
Os08t0345700-01	Rice	extracellular	76.29	76.66
GSMUA_Achr3P11650_001	Banana	cytosol	68.71	68.93
GSMUA_Achr1P06200_001	Banana	cytosol	68.39	68.72
KRG89187	Soybean	endoplasmic reticulum	68.06	68.4
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	67.74	68.07
VIT_18s0122g00510.t01	Wine grape	cytosol	67.1	67.53
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	66.29	66.61
PGSC0003DMT400075360	Potato	cytosol	66.13	66.45
Os02t0714200-01	Rice	cytosol, plasma membrane	65.81	66.13
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	65.0	65.42
PGSC0003DMT400025919	Potato	cytosol	64.84	65.26
Os06t0326400-01	Rice	cytosol, plasma membrane, plastid	65.32	65.11
CDX88295	Canola	cytosol	63.71	64.02
Bra015734.1-P	Field mustard	cytosol	63.55	63.86
CDX87587	Canola	cytosol	63.23	63.53
CDY67203	Canola	cytosol	63.23	63.33
Bra025858.1-P	Field mustard	cytosol	63.23	63.33
AT1G76550.1	Thale cress	cytosol	62.9	63.21
CDY67022	Canola	cytosol	63.06	63.17
CDY33660	Canola	cytosol	60.81	63.04
CDX96611	Canola	cytosol	60.81	63.04
AT1G20950.1	Thale cress	cytosol	62.42	63.03
Os06t0247500-01	Rice	plastid	34.84	38.1

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EntrezGene:9271821	UniProt:A0A0P0XL64	ProteinID:BAT07325.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872
GO:GO:0047334	GO:GO:0061615	HAMAP:MF_01980	EnsemblPlantsGene:Os09g0298100	EnsemblPlants:Os09t0298100-00	PFAM:PF00365
PIRSF:PIRSF005677	InterPro:PKF_sf	PANTHER:PTHR43650	PANTHER:PTHR43650:SF4	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom
SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI0003939F34	RefSeq:XP_015612223.1	:	:

Description

pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 4, PFP-alpha subunit 4Similar to predicted protein. (Os09t0298100-00)

Coordinates

chr9:+:7240336..7244713

Molecular Weight (calculated)

68188.0 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.096

Length

620 amino acids

Sequence
(BLAST)

001: MSMNADLGKP RELTGLQQRR ALYQPELPPC LEGKAIRVEF GDSTTTIDPT CANMVVQEFP NTFGQPLVHF LKPNKMDAQA NDEHPPIRVG VVFSGRQSPG
101: GHNVIWGIYD AMKTQNLQSV LLGFIGGTEG LFANQTLEIT DDVLSAYRNQ GGFDFLGRTV DQIHTTEQVN AAMSTCCDLD LDGLVIIGGV TSNSDAAQLA
201: ETFANHNCKT KVVGVPVSLN GDLKNQFVET TVGFDTVCKV NSQLISNVCL DAISAGKYYH FVRVMGWKAS HVALECALQS QPNMVILGEE VAFSKLTLKE
301: IISKICDGVQ ARAAQEKYHG VLLISEGLIE SIPEMFALIQ EINILHSNKV PENNIPSQLS PWATALYNYL PPFIRRELLL HQDSDNSAQL SQIDTEQLLA
401: HLVEAEMNKR MKEGKYIGRK FSSVCHFFGY QARGSLPSNF DCDYAYVLGH ICMHILAAGL NGYMAFATNL KEPTNKWRCA AVPLTAMMSV KRHSRSPGAV
501: PTGKPVIHPS PVDLQGKAYA LLREKASSFL LDDFYRTPGG IQFDGSGTNV KPITLTVEDQ DYLGDIELLQ DYLEKVRNIV KPGCSREILK AAISSMSSVK
601: DVLKVMSAPF YAELPLFNLN

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.