Factsheet for Os08t0345700-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 5
extracellular 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

extracellular: 25047395
extracellular: 26194822
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 26194822 doi

WK Cho, TK Hyun, D Kumar, Y Rim, XY Chen, Y Jo, S Kim, KW Lee, ZY Park, WJ Lucas, JY Kim

Department of Industrial Plant Science and Technology, College of Agricultural, Life and Environmental Sciences, Chungbuk National University, Cheongju 361-763, Korea., Department of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea., Department of Plant Biology, University of California, Davis, CA 95616, USA., Division of Applied Life Science (BK21plus), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0264500-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	Os01t0267900-01	AT2G41100.1	17360592
AT1G20950.1	Os01t0279300-01	AT2G41100.1	17360592
AT1G20950.1	Os01t0810300-01	AT2G41100.1	17360592
AT1G20950.1	Os03t0319300-01	AT2G41100.1	17360592
AT1G20950.1	Os05t0491000-01	AT2G41100.1	17360592
AT1G20950.1	Os05t0491100-01	AT2G41100.1	17360592
AT1G20950.1	Os07t0687200-02	AT2G41100.1	17360592
AT1G20950.1	Os12t0603800-00	AT2G41100.1	17360592
AT1G20950.1	Os03t0743500-02	AT4G14640.1	17360592
AT1G20950.1	Os12t0264500-02	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032386_P003	Maize	cytosol	91.73	91.59
KXG34347	Sorghum	cytosol	91.41	91.26
TraesCS5A01G072700.2	Wheat	cytosol, golgi	89.14	88.57
HORVU5Hr1G019030.9	Barley	cytosol	89.14	88.42
OQU80257	Sorghum	cytosol	75.04	86.38
TraesCS5D01G085500.2	Wheat	golgi	89.47	83.13
TraesCS5B01G078300.1	Wheat	golgi	88.82	82.53
Os09t0298100-00	Rice	plastid	76.66	76.29
GSMUA_Achr1P06200_001	Banana	cytosol	68.07	68.07
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	67.42	67.42
KRG89187	Soybean	endoplasmic reticulum	67.26	67.26
GSMUA_Achr3P11650_001	Banana	cytosol	67.26	67.15
VIT_18s0122g00510.t01	Wine grape	cytosol	66.94	67.05
Os06t0326400-01	Rice	cytosol, plasma membrane, plastid	66.94	66.4
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	65.96	65.96
PGSC0003DMT400075360	Potato	cytosol	65.8	65.8
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	64.83	64.94
Os02t0714200-01	Rice	cytosol, plasma membrane	64.83	64.83
PGSC0003DMT400025919	Potato	cytosol	64.67	64.77
CDX87587	Canola	cytosol	63.86	63.86
Bra015734.1-P	Field mustard	cytosol	63.7	63.7
CDX88295	Canola	cytosol	63.37	63.37
Bra025858.1-P	Field mustard	cytosol	63.05	62.84
CDY67203	Canola	cytosol	63.05	62.84
CDY33660	Canola	cytosol	60.78	62.71
CDX96611	Canola	cytosol	60.78	62.71
CDY67022	Canola	cytosol	62.88	62.68
AT1G20950.1	Thale cress	cytosol	62.07	62.38
AT1G76550.1	Thale cress	cytosol	62.24	62.24
Os06t0247500-01	Rice	plastid	35.33	38.45

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EntrezGene:4345338	EMBL:AK099939	EMBL:AK101073
ProteinID:BAC75438.1	ProteinID:BAF23516.1	ProteinID:BAT05032.1	ProteinID:EEE68536.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334	GO:GO:0061615
EMBL:KR905693	HAMAP:MF_01980	EnsemblPlantsGene:Os08g0345700	EnsemblPlants:Os08t0345700-01	PFAM:PF00365	PIRSF:PIRSF005677
InterPro:PKF_sf	PANTHER:PTHR43650	PANTHER:PTHR43650:SF5	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	UniProt:Q84QT9
SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI0000185CB7	RefSeq:XP_015650397.1	:	:

Description

pyrophosphate-dependent phosphofrucokinase alpha-subunit, PFP alpha-subunit, pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 3, PFP-alpha subunit 3Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-01);Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-02)

Coordinates

chr8:+:15658493..15663867

Molecular Weight (calculated)

67158.2 Da

IEP (calculated)

7.169

GRAVY (calculated)

-0.022

Length

617 amino acids

Sequence
(BLAST)

001: MNADFGAPKD LAGGLQQRRS LYQPTLPPCL QGATVKVEYG DATTTIDPTC ANVVAQAFPR TYGQPLVSFV APPPDAVDKD RAPIRVGVVF SGRQSPGGHN
101: VIWGLHDALK AYNPHSVLYG FVGGTEGLFA NKTIEITDDV LASYKNQGGF DLLGRSIDQI RSTKQVNAAM TTCNNLNLDG LVIIGGVTSN SDAAQLAEAL
201: VQNNCKTKVV GVPVSLNGDL KNQFVETTVG FDTVCKVNSQ LVSNVCLDAI SAGKYYYFVR LMGRKASHVA FECALQSHPN MLILAEEVAL SKLTLMEVIN
301: KICDGVQARA ELGKFHGVLL IPEGLIESIP EMYALLQEIN ILHNNNVPVA EMPSQLSPWA AALFQFLPPF IRRELLLHQE SDNSAQLSQI DTEQLLAHLV
401: EAEMIKRTKE GRYKGRKFSS VCHFFGYQAR GSVPSNFDCD YAYALGRISL HMIAAGLTGY MATVANLKDP VDKWRCAAAP LTAMMSVKRH LRGPGAIPIG
501: KPAIHPSPID LKGKAYELLR EKASSFLLDD FYRTPGGIQY EGPGCNAKPI TLTIENQDYM GDIEILKDCL SKVRTMVKPG CSREVLKAAI SSMLSVTDVL
601: TVMSHPLNAE LPLYHFN

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.