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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • mitochondrion 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
 golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G190800.1
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G206000.1
TraesCS1B01G319300.1
TraesCS1D01G194800.2
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5A01G382800.2
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20950.1 TraesCS1A01G308700.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS1A01G308800.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS1B01G319300.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS1D01G308000.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS2B01G113800.2 AT2G41100.1 17360592
AT1G20950.1 TraesCS3A01G184500.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3A01G191900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3A01G335000.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3B01G219900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3B01G365900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3D01G188600.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3D01G194500.2 AT2G41100.1 17360592
AT1G20950.1 TraesCS3D01G328300.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS4B01G131100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS4D01G126100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G057100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G057200.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G139700.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5B01G059900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5B01G137100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5D01G068000.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5D01G068100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5D01G153400.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G382800.2 AT4G14640.1 17360592
AT1G20950.1 TraesCS1A01G190800.1 AT5G65940.1 21798944
AT1G20950.1 TraesCS1B01G206000.1 AT5G65940.1 21798944
AT1G20950.1 TraesCS1D01G194800.2 AT5G65940.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G072700.2 Wheat cytosol, golgi 91.72 98.07
TraesCS5D01G085500.2 Wheat golgi 96.99 96.99
HORVU5Hr1G019030.9 Barley cytosol 90.21 96.3
Zm00001d032386_P003 Maize cytosol 83.13 89.32
Os08t0345700-01 Rice extracellular 82.53 88.82
KXG34347 Sorghum cytosol 82.23 88.35
OQU80257 Sorghum cytosol 67.47 83.58
GSMUA_Achr3P11650_001 Banana cytosol 64.76 69.58
GSMUA_Achr1P06200_001 Banana cytosol 63.7 68.56
VIT_18s0122g00510.t01 Wine grape cytosol 63.1 68.02
Solyc12g095760.1.1 Tomato cytosol, extracellular, nucleus, unclear 62.95 67.75
KRH49514 Soybean cytosol, endoplasmic reticulum, nucleus 62.8 67.59
PGSC0003DMT400075360 Potato cytosol 62.8 67.59
KRG89187 Soybean endoplasmic reticulum 62.65 67.42
Solyc04g082880.2.1 Tomato cytosol, nucleus, plastid, unclear 61.75 66.56
PGSC0003DMT400025919 Potato cytosol 61.6 66.4
TraesCS6B01G307200.1 Wheat cytosol 61.14 65.91
TraesCS7B01G193600.1 Wheat cytosol 60.54 65.79
Bra015734.1-P Field mustard cytosol 59.79 64.34
CDX88295 Canola cytosol 59.64 64.18
CDX87587 Canola cytosol 59.49 64.02
AT1G76550.1 Thale cress cytosol 59.34 63.86
CDY67203 Canola cytosol 59.49 63.81
Bra025858.1-P Field mustard cytosol 59.49 63.81
CDY67022 Canola cytosol 59.34 63.65
CDX96611 Canola cytosol 57.23 63.55
CDY33660 Canola cytosol 57.08 63.38
AT1G20950.1 Thale cress cytosol 58.58 63.35
TraesCS7B01G104400.1 Wheat plastid 31.63 37.5
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11Gene3D:1.10.10.480
MapMan:2.1.1.1.2Gene3D:3.40.50.450Gene3D:3.40.50.460GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003872GO:GO:0005488GO:GO:0005524GO:GO:0005975GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0047334HAMAP:MF_01980PFAM:PF00365InterPro:PKF_sf
PANTHER:PTHR43650PANTHER:PTHR43650:SF5InterPro:PfpB_PPi_PFKInterPro:Phosphofructokinase_domSUPFAM:SSF53784TIGRFAMs:TIGR02477
EnsemblPlantsGene:TraesCS5B01G078300EnsemblPlants:TraesCS5B01G078300.1::::
Description
No Description!
Coordinates
chr5B:+:94120842..94125835
Molecular Weight (calculated)
72584.8 Da
IEP (calculated)
7.777
GRAVY (calculated)
-0.071
Length
664 amino acids
Sequence
(BLAST)
001: MTIRTLSYLP RLSSPDQRTA PAPQLHQPAS KIVNLVPSDL SRGMNADYGV PTELAGPLQQ RRALYQPRLP PCLQGATVRV EYDDATTTID PTGAHAVAQA
101: FPRTYGQRLV TFLSPDDTAG AVKAVNERQP IRVGVVFSGR QSPGGHNVVW GLHDALKVYN PQSILYGFIG GTEGLFANKT LEITNDVLAS YKNQGGFDLL
201: GRSIDQIRSS KQVSAAMTTC QDLNLDGLVI VGGVTSNSDA AQLAETLVQK NCKTKVVGVP VSLNGDLKNQ FVETTVGFDT VCKVNSQLIS NVCLDAISAG
301: KYYYFVRLMG RKASHVALEC ALQSHPNMLI MGEEVALSKL TLMEVINKIC DGVQARAELG KHHGVLLIPE GLIESIPEMY ALIQEISILH NNNVPVTEIP
401: TQLSPWAAAL FQFLPPFIRR ELLLHQESDN SAQLSQIDTE QLLAHLVEAE MIKRTKEGRY KGKKFSSVCH FFGYQARGSL PSNFDCDYAY VLGHISLHMI
501: AAGLTGYMAT VANLKDPVHK WRCAAAPLTA MMSVRRHLRG PGAIPIGKPA IHPSPIDLKG KAYELLREKA SSFLLDDFYR TPGGIQFEGP GSDAKPITLT
601: IEDQDYMGDI EMLKLYLDKV KTIVKPGCSR DTLKAAISSM ISVTHVLTVM SHPLNAELPL YHFN
Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)
001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ
Arabidopsis Description
PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.