Factsheet for PGSC0003DMT400075360

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400000043
PGSC0003DMT400000054
PGSC0003DMT400004521
PGSC0003DMT400004567
PGSC0003DMT400004585
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400066409
PGSC0003DMT400066411
PGSC0003DMT400066414
PGSC0003DMT400066419
PGSC0003DMT400066424
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT1G20950.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT1G20950.1	PGSC0003DMT400000043	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400000054	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400004521	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400004567	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400004585	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066409	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066411	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066414	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066419	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066424	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	98.87	98.87
PGSC0003DMT400025919	Potato	cytosol	90.92	91.07
VIT_18s0122g00510.t01	Wine grape	cytosol	88.65	88.8
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	84.6	84.6
KRG89187	Soybean	endoplasmic reticulum	84.12	84.12
EES05627	Sorghum	cytosol	82.82	82.95
Os02t0714200-01	Rice	cytosol, plasma membrane	82.5	82.5
Bra025858.1-P	Field mustard	cytosol	82.33	82.07
CDY67022	Canola	cytosol	82.33	82.07
CDY67203	Canola	cytosol	82.33	82.07
Zm00001d017830_P001	Maize	cytosol	82.17	82.04
AT1G20950.1	Thale cress	cytosol	81.52	81.92
TraesCS6D01G259500.1	Wheat	golgi	81.69	81.82
TraesCS6B01G307200.1	Wheat	cytosol	81.52	81.66
AT1G76550.1	Thale cress	cytosol	81.52	81.52
CDY33660	Canola	cytosol	78.93	81.44
CDX87587	Canola	cytosol	81.2	81.2
Bra015734.1-P	Field mustard	cytosol	81.2	81.2
CDX96611	Canola	cytosol	78.61	81.1
TraesCS6A01G279100.2	Wheat	cytosol	76.34	81.07
CDX88295	Canola	cytosol	81.04	81.04
Os06t0326400-01	Rice	cytosol, plasma membrane, plastid	80.55	79.9
OQU76351	Sorghum	cytosol	79.42	78.91
HORVU6Hr1G070270.5	Barley	cytosol	81.85	77.45
TraesCS7B01G193600.1	Wheat	cytosol	76.5	77.25
TraesCS7D01G228500.1	Wheat	cytosol	76.34	77.09
TraesCS7A01G226000.2	Wheat	cytosol	76.34	77.09
Zm00001d051629_P003	Maize	cytosol	77.15	76.28
Zm00001d045919_P001	Maize	mitochondrion	57.05	73.95
HORVU7Hr1G047000.11	Barley	cytosol	76.01	70.31
TraesCS5A01G072700.2	Wheat	cytosol, golgi	67.75	67.31
HORVU5Hr1G019030.9	Barley	cytosol	67.59	67.04
Zm00001d032386_P003	Maize	cytosol	66.45	66.34
Os09t0298100-00	Rice	plastid	66.45	66.13
KXG34347	Sorghum	cytosol	65.96	65.86
Os08t0345700-01	Rice	extracellular	65.8	65.8
KXG35340	Sorghum	cytosol	66.29	64.82
OQU80257	Sorghum	cytosol	55.27	63.62
Zm00001d020006_P001	Maize	cytosol	55.59	63.05
TraesCS5B01G078300.1	Wheat	golgi	67.59	62.8
TraesCS5D01G085500.2	Wheat	golgi	67.42	62.65
GSMUA_AchrUn_...	Banana	cytosol	13.45	61.48
Zm00001d035883_P001	Maize	mitochondrion	8.91	57.29
Zm00001d004479_P001	Maize	mitochondrion	17.02	54.12
GSMUA_AchrUn_...	Banana	cytosol	8.43	52.0
Zm00001d008809_P001	Maize	cytosol	19.45	50.63
Zm00001d015529_P001	Maize	mitochondrion	14.59	49.72
Zm00001d021503_P001	Maize	cytosol	23.18	49.65
Zm00001d032792_P001	Maize	cytosol	8.91	47.01
Zm00001d043564_P001	Maize	cytosol	22.37	46.15
Zm00001d003637_P001	Maize	cytosol	4.7	46.03
Zm00001d003638_P001	Maize	mitochondrion	8.91	39.01
Zm00001d036537_P007	Maize	cytosol	7.94	38.89
PGSC0003DMT400001785	Potato	plastid	34.36	38.27
PGSC0003DMT400043111	Potato	plastid	34.2	37.08
Zm00001d037466_P002	Maize	cytosol	6.32	32.5
Zm00001d013450_P001	Maize	cytosol, plastid	13.13	27.84

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
EntrezGene:102601673	MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334	GO:GO:0061615
UniProt:M1CV13	HAMAP:MF_01980	PFAM:PF00365	EnsemblPlantsGene:PGSC0003DMG400029309	PGSC:PGSC0003DMG400029309	EnsemblPlants:PGSC0003DMT400075360
PIRSF:PIRSF005677	InterPro:PKF_sf	PANTHER:PTHR43650	PANTHER:PTHR43650:SF2	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom
SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI0002951F1E	RefSeq:XP_006342524.1	SEG:seg	:

Description

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Source:PGSC_GENE;Acc:PGSC0003DMG400029309]

Coordinates

chr12:-:57596885..57604714

Molecular Weight (calculated)

67356.1 Da

IEP (calculated)

7.384

GRAVY (calculated)

-0.149

Length

617 amino acids

Sequence
(BLAST)

001: MDADYGIARE LSDLQKLRSQ YQPELPPCLQ GTTVRVELGD ATTAADHSGE HVISRSFPHT YGQPLAHFLR ATAKVSDAQI ITEHPAKRVG IVFCGRQSPG
101: GHNVIWGIHD ALKIHNPNST LLGFLGGSEG LFAQKTLEIT NDILATYKNQ GGYDMLGRTK DQIRTTEQVN AAMAACKALK LDALIIIGGV TSNTDAAQLA
201: ETFAEAKCQT KVVGVPVTLN GDLKNQFVET NVGFDTICKV NSQLISNMCT DALSAEKYYY FIRLMGRKAS HVALECTLQS HPNMVILGEE VAASKLTLFD
301: ITNKICDTVQ ARAEQDKNHG VILLPEGLIE SIPEVYALLQ EIHGLLTQGV STDKISSQLS PWASALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLIA
401: HLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATLTNL KNPVNKWRCG AAPITAMMSV KRYGRGPGKA
501: SLGKPAVHPA TVDLKGKSYE LLSQNATKFL LDDVYRNPGP LQFDGPGADA KAITLCVEDQ DYMGRIKKLQ EYLDKVRTIV KPGCSQDVLK AALSAMSSVT
601: EILSVMTSPS SNVNTPF

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.