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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • peroxisome 3
  • nucleus 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, peroxisome, plastid
BaCelLo:plastid
MultiLoc:peroxisome
Plant-mPloc:nucleus
PProwler:peroxisome
PTS1:peroxisome
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400020128
PGSC0003DMT400023026
PGSC0003DMT400044692
PGSC0003DMT400044886
PGSC0003DMT400049429
PGSC0003DMT400051417
PGSC0003DMT400070848
PGSC0003DMT400095815

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 PGSC0003DMT400051417 AT1G14830.1 21798944
AT5G65940.1 PGSC0003DMT400020128 AT2G42790.1 21798944
AT5G65940.1 PGSC0003DMT400044692 AT2G42790.1 21798944
AT5G65940.1 PGSC0003DMT400023026 AT3G12110.1 21798944
AT5G65940.1 PGSC0003DMT400049429 AT3G12110.1 21798944
AT5G65940.1 PGSC0003DMT400044886 AT5G56630.1 21798944
AT5G65940.1 PGSC0003DMT400070848 AT5G56630.1 21798944
AT5G65940.1 PGSC0003DMT400095815 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 41.1 88.24
PGSC0003DMT400066414 Potato cytosol 65.75 56.14
PGSC0003DMT400004521 Potato cytosol 87.67 54.7
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 55.48 54.36
Zm00001d007746_P002 Maize peroxisome 59.59 45.79
PGSC0003DMT400004585 Potato extracellular 76.71 41.95
Solyc01g108790.1.1 Tomato nucleus 47.95 39.77
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 65.75 36.09
GSMUA_Achr5P13890_001 Banana nucleus 37.67 34.38
Zm00001d007726_P001 Maize peroxisome 57.53 34.29
PGSC0003DMT400043000 Potato cytosol 43.84 32.82
PGSC0003DMT400000054 Potato cytosol 76.71 29.17
CDY45442 Canola mitochondrion 65.75 29.0
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 71.23 28.11
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 70.55 26.34
CDY57769 Canola peroxisome 66.44 26.01
AT5G65940.1 Thale cress peroxisome 67.12 25.93
Bra031802.1-P Field mustard cytosol 66.44 25.8
CDY55104 Canola cytosol 66.44 25.8
CDY31775 Canola peroxisome 67.12 25.59
KRH07311 Soybean nucleus 67.12 25.32
CDX97894 Canola peroxisome 67.12 25.26
AT2G30660.1 Thale cress peroxisome 64.38 24.87
CDY45439 Canola plastid 67.12 24.81
AT2G30650.1 Thale cress peroxisome 63.7 24.6
EER91893 Sorghum cytosol 63.7 24.09
Bra039968.1-P Field mustard peroxisome 65.75 24.06
CDY62818 Canola peroxisome 65.75 23.94
Bra018392.1-P Field mustard cytosol 60.96 23.92
TraesCS1D01G194800.2 Wheat cytosol 62.33 23.88
CDY31769 Canola peroxisome 65.07 23.69
TraesCS1B01G206000.1 Wheat cytosol 60.96 23.36
TraesCS1A01G190800.1 Wheat plastid 62.33 23.21
Bra039975.1-P Field mustard peroxisome 60.27 22.86
Bra018395.1-P Field mustard cytosol 58.22 22.79
Zm00001d021132_P004 Maize extracellular 62.33 22.52
Zm00001d007732_P002 Maize extracellular 43.15 22.11
OQU84058 Sorghum mitochondrion 61.64 21.95
PGSC0003DMT400069137 Potato cytosol, mitochondrion 42.47 21.91
HORVU1Hr1G049960.6 Barley mitochondrion 62.33 21.56
Zm00001d023779_P001 Maize extracellular 55.48 20.98
KXG29172 Sorghum peroxisome 55.48 20.93
GSMUA_Achr5P13870_001 Banana cytosol 56.16 20.76
GSMUA_Achr8P14800_001 Banana cytosol 54.79 20.15
Os12t0264500-02 Rice endoplasmic reticulum 62.33 17.74
Zm00001d007740_P001 Maize peroxisome 43.84 16.98
PGSC0003DMT400057075 Potato cytosol, plastid 42.47 15.5
PGSC0003DMT400020300 Potato cytosol 40.41 15.36
PGSC0003DMT400054311 Potato cytosol 15.07 13.84
PGSC0003DMT400079108 Potato cytosol 28.77 12.21
PGSC0003DMT400041136 Potato cytosol 28.77 12.1
GSMUA_Achr5P13900_001 Banana cytosol 23.29 10.9
PGSC0003DMT400065713 Potato cytosol, mitochondrion 15.75 9.58
PGSC0003DMT400066409 Potato cytosol 7.53 7.91
PGSC0003DMT400004567 Potato extracellular 5.48 6.06
PGSC0003DMT400066419 Potato cytosol 7.53 4.58
Zm00001d007728_P001 Maize cytosol 1.37 1.41
Protein Annotations
EnsemblPlants:PGSC0003DMT400066411EnsemblPlantsGene:PGSC0003DMG403025826Gene3D:3.90.226.40GO:GO:0003674GO:GO:0003824GO:GO:0003860
GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sfInterPro:HIBYL-CoA-HPANTHER:PTHR43176PANTHER:PTHR43176:SF6PFAM:PF16113
PGSC:PGSC0003DMG403025826SUPFAM:SSF52096UniParc:UPI000296C294UniProt:M1CFJ3MapMan:35.1:
Description
Enoyl-CoA-hydratase [Source:PGSC_GENE;Acc:PGSC0003DMG403025826]
Coordinates
chr1:+:85147023..85149672
Molecular Weight (calculated)
17093.5 Da
IEP (calculated)
9.169
GRAVY (calculated)
-0.681
Length
146 amino acids
Sequence
(BLAST)
001: MKIINRCFSR RTIEEIISTL ESKALDKKDD WISSTIQSLK KASPTSLKIS LRSIREGRLQ GVGSCLVREY RMACHVLKGE FSKDVHEGYR AIFIDRDKNP
101: KWEPSRLELI RDDDVDRYFS KVDDEDWEDL KLPPRSNLSR YSIAKL
Best Arabidopsis Sequence Match ( AT2G30650.1 )
(BLAST)
001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL
Arabidopsis Description
Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.