CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018395.1-P	Field mustard	cytosol	86.33	91.42
CDY57769	Canola	peroxisome	70.38	74.53
AT2G30660.1	Thale cress	peroxisome	71.14	74.34
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	27.85	73.83
CDY45442	Canola	mitochondrion	61.77	73.72
CDY55104	Canola	cytosol	70.13	73.67
CDY31775	Canola	peroxisome	71.14	73.37
CDX97894	Canola	peroxisome	71.9	73.2
CDY62818	Canola	peroxisome	72.66	71.57
AT2G30650.1	Thale cress	peroxisome	68.1	71.16
CDY31769	Canola	peroxisome	72.15	71.07
PGSC0003DMT400066411	Potato	nucleus	24.81	67.12
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	11.14	64.71
PGSC0003DMT400066414	Potato	cytosol	27.59	63.74
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	59.49	63.51
Solyc01g080930.2.1	Tomato	cytosol	61.01	62.92
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	59.75	62.27
PGSC0003DMT400004567	Potato	extracellular	20.76	62.12
KRH07311	Soybean	nucleus	58.99	60.21
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	40.25	59.77
PGSC0003DMT400066409	Potato	cytosol	21.01	59.71
Zm00001d007726_P001	Maize	peroxisome	36.71	59.18
PGSC0003DMT400000054	Potato	cytosol	56.96	58.59
PGSC0003DMT400004521	Potato	cytosol	34.68	58.55
EER91893	Sorghum	cytosol	55.44	56.74
Zm00001d007746_P002	Maize	peroxisome	27.09	56.32
Solyc01g094090.2.1	Tomato	cytosol	46.84	56.23
TraesCS1B01G206000.1	Wheat	cytosol	53.92	55.91
GSMUA_Achr5P13900_001	Banana	cytosol	44.05	55.77
TraesCS1D01G194800.2	Wheat	cytosol	53.67	55.64
PGSC0003DMT400004585	Potato	extracellular	37.22	55.06
GSMUA_Achr8P14800_001	Banana	cytosol	54.94	54.66
TraesCS1A01G190800.1	Wheat	plastid	53.67	54.08
GSMUA_Achr5P13870_001	Banana	cytosol	53.67	53.67
Zm00001d021132_P004	Maize	extracellular	54.68	53.47
PGSC0003DMT400066419	Potato	cytosol	32.41	53.33
Zm00001d023779_P001	Maize	extracellular	51.9	53.11
KXG29172	Sorghum	peroxisome	50.63	51.68
OQU84058	Sorghum	mitochondrion	53.42	51.46
HORVU1Hr1G049960.6	Barley	mitochondrion	54.68	51.18
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	46.08	46.55
Zm00001d007732_P002	Maize	extracellular	33.42	46.32
Zm00001d007740_P001	Maize	peroxisome	43.8	45.89
Os12t0264500-02	Rice	endoplasmic reticulum	53.92	41.52
GSMUA_Achr5P13890_001	Banana	nucleus	16.2	40.0
CDX67831	Canola	mitochondrion	40.25	39.55
CDX98420	Canola	mitochondrion	40.25	39.55
CDY23311	Canola	mitochondrion	40.76	39.27
CDY39880	Canola	mitochondrion	40.51	39.02
CDX86518	Canola	cytosol	36.71	37.86
Solyc01g108790.1.1	Tomato	nucleus	16.71	37.5
CDY15584	Canola	cytosol	35.7	37.2
CDY15581	Canola	cytosol	25.32	36.63
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	20.51	36.0
Zm00001d007728_P001	Maize	cytosol	12.66	35.21
CDY64934	Canola	cytosol	33.67	34.91
CDY72221	Canola	mitochondrion	18.23	34.62
CDY15583	Canola	cytosol	31.39	33.6
CDY01126	Canola	mitochondrion, plastid	33.67	31.52
CDX93011	Canola	plastid	32.91	30.73
CDX86519	Canola	extracellular	15.19	30.3
CDX94817	Canola	mitochondrion, plastid	32.41	30.26

Protein Annotations

EnsemblPlants:CDY45439	EnsemblPlantsGene:GSBRNA2T00082053001	Gene3D:3.90.226.40	GO:A0A078I7Q9	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PFAM:PF16113
ProteinID:CDY45439	ProteinID:CDY45439.1	SEG:seg	SUPFAM:SSF52096	UniParc:UPI0004EE3DA9	UniProt:A0A078I7Q9
MapMan:4.2.7.4	MapMan:4.2.7.6.1	:	:	:	:

Description

BnaA05g12620DBnaA05g12620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7Q9]

Coordinates

chrLK032625:+:69807..72967

Molecular Weight (calculated)

44789.3 Da

IEP (calculated)

9.901

GRAVY (calculated)

-0.324

Length

395 amino acids

Sequence
(BLAST)

001: MLNVSKKNHS SHNSIRNRQG RSDIKSKWPQ RLSVRILTLN RPKQLNALNS NMITRLMQLF LEYEEDPNVK IVILKGQGRA FCVGGDPLPV FRDIVIQGKS
101: WRVGADFFSE QYKLDHFMAT YSKVQISIGG AGISVHGRFR IATEKTVFAM PETELGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV
201: PSSRLNALEA DLCKVGSSDP VTFASAILNA YTKHPKLKQH TFNSSLRRLD VIDRCFSRRT MEEIISALEK EATEKPNEWI SATIRALKKA SPASLKISLR
301: SIREGRFQGV GQCLIREYRM VCNVLKREIS KDFVEGCRAV VIDKDRNPKW EPRSLEEMKD NMVERYFERV DEEDGWEDLK LSPRKNLPAL IIAKL

Best Arabidopsis Sequence Match ( AT2G30650.1 )
(BLAST)

001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL

Arabidopsis Description

Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.