Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15584 | Canola | cytosol | 77.33 | 45.91 |
| CDX86518 | Canola | cytosol | 77.78 | 45.69 |
| AT1G06550.1 | Thale cress | cytosol | 73.33 | 42.64 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 68.89 | 39.85 |
| Solyc12g011160.1.1 | Tomato | cytosol | 66.22 | 38.8 |
| PGSC0003DMT400020300 | Potato | cytosol | 65.33 | 38.28 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 63.11 | 36.88 |
| Os01t0752200-01 | Rice | plasma membrane | 63.56 | 36.76 |
| EES03617 | Sorghum | cytosol | 61.78 | 36.29 |
| KRG98957 | Soybean | nucleus | 64.44 | 36.16 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 62.67 | 36.15 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 61.78 | 36.1 |
| CDY15583 | Canola | cytosol | 59.11 | 36.04 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 61.33 | 35.94 |
| KRH46020 | Soybean | vacuole | 63.56 | 35.93 |
| PGSC0003DMT400079108 | Potato | cytosol | 54.67 | 35.76 |
| CDX86519 | Canola | extracellular | 30.67 | 34.85 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 50.67 | 34.23 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 36.44 | 34.17 |
| PGSC0003DMT400041136 | Potato | cytosol | 52.44 | 34.01 |
| Solyc06g054520.1.1 | Tomato | cytosol | 59.56 | 32.52 |
| CDY72221 | Canola | mitochondrion | 28.89 | 31.25 |
| Solyc07g044710.1.1 | Tomato | plastid | 53.33 | 30.46 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 62.67 | 29.87 |
| Solyc07g043680.2.1 | Tomato | cytosol | 51.56 | 29.15 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 36.0 | 28.62 |
| Solyc07g044720.1.1 | Tomato | plastid | 53.33 | 28.5 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 50.22 | 28.25 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 52.89 | 27.87 |
| PGSC0003DMT400054311 | Potato | cytosol | 18.67 | 26.42 |
| Solyc07g043690.1.1 | Tomato | cytosol | 21.78 | 25.39 |
| CDY15581 | Canola | cytosol | 30.67 | 25.27 |
| CDY31775 | Canola | peroxisome | 40.44 | 23.76 |
| CDX97894 | Canola | peroxisome | 40.44 | 23.45 |
| CDY57769 | Canola | peroxisome | 38.67 | 23.32 |
| CDY55104 | Canola | cytosol | 38.67 | 23.14 |
| CDY31769 | Canola | peroxisome | 39.56 | 22.19 |
| CDY62818 | Canola | peroxisome | 38.67 | 21.7 |
| CDX98420 | Canola | mitochondrion | 37.78 | 21.14 |
| CDX67831 | Canola | mitochondrion | 37.78 | 21.14 |
| CDY45442 | Canola | mitochondrion | 30.67 | 20.85 |
| CDY45439 | Canola | plastid | 36.0 | 20.51 |
| CDY23311 | Canola | mitochondrion | 36.0 | 19.76 |
| CDY39880 | Canola | mitochondrion | 36.0 | 19.76 |
| CDY64934 | Canola | cytosol | 33.33 | 19.68 |
| CDY01126 | Canola | mitochondrion, plastid | 33.33 | 17.77 |
| CDX93011 | Canola | plastid | 33.33 | 17.73 |
| CDX94817 | Canola | mitochondrion, plastid | 32.89 | 17.49 |
| Solyc07g044740.1.1 | Tomato | cytosol | 4.0 | 6.92 |
| CDY71268 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 3.56 | 5.37 |
Protein Annotations
| EnsemblPlants:CDY49269 | EnsemblPlantsGene:GSBRNA2T00092683001 | Gene3D:3.90.226.10 | GO:A0A078IIS0 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003860 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 |
| PFAM:PF16113 | ProteinID:CDY49269 | ProteinID:CDY49269.1 | SUPFAM:SSF52096 | TMHMM:TMhelix | UniParc:UPI0004EEBF27 |
| UniProt:A0A078IIS0 | MapMan:50.3.1 | : | : | : | : |
Description
BnaA03g50820DBnaA03g50820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIS0]
Coordinates
chrLK032822:+:30381..32270
Molecular Weight (calculated)
25550.2 Da
IEP (calculated)
8.733
GRAVY (calculated)
0.208
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFDWIKIQF LLLSTSESGF QSNRVSSRLI NRPRQLNVIS SEVVYILAEY LETWEKDDKT KLILIKGAGR AFSAGGDLKM FYDGRDLKDS CLEVVYRMYW
101: LCYHIHTYKK TQVSLVNGIS MGGGASLMVP MKFSVVTEKT VFATPEASIG FHTDCGFSYI HSRLPGHLGE FLALTGARLN GKELVAIGMA THFVPSAVNF
201: FFFWNAFLSY KYIRAYVLLD ELFLL
101: LCYHIHTYKK TQVSLVNGIS MGGGASLMVP MKFSVVTEKT VFATPEASIG FHTDCGFSYI HSRLPGHLGE FLALTGARLN GKELVAIGMA THFVPSAVNF
201: FFFWNAFLSY KYIRAYVLLD ELFLL
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.