Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 5
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 65.74 | 91.52 |
| Solyc07g044720.1.1 | Tomato | plastid | 94.92 | 88.84 |
| Solyc07g044740.1.1 | Tomato | cytosol | 27.92 | 84.62 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 88.32 | 81.5 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 48.73 | 80.0 |
| Solyc07g043690.1.1 | Tomato | cytosol | 37.31 | 76.17 |
| Solyc07g043680.2.1 | Tomato | cytosol | 72.84 | 72.11 |
| Solyc12g011160.1.1 | Tomato | cytosol | 63.45 | 65.1 |
| Solyc06g054520.1.1 | Tomato | cytosol | 65.74 | 62.86 |
| Bra030657.1-P | Field mustard | cytosol | 59.39 | 62.23 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 60.91 | 61.7 |
| CDX86518 | Canola | cytosol | 59.39 | 61.1 |
| CDY15584 | Canola | cytosol | 58.38 | 60.69 |
| KRH46020 | Soybean | vacuole | 60.91 | 60.3 |
| KRG98957 | Soybean | nucleus | 60.15 | 59.1 |
| AT1G06550.1 | Thale cress | cytosol | 57.61 | 58.66 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 55.84 | 57.29 |
| EES03617 | Sorghum | cytosol | 55.58 | 57.18 |
| CDY15581 | Canola | cytosol | 39.59 | 57.14 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 46.7 | 55.26 |
| Bra030656.1-P | Field mustard | cytosol | 50.25 | 54.85 |
| CDY15583 | Canola | cytosol | 51.27 | 54.74 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 53.05 | 54.29 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 53.05 | 54.29 |
| Os01t0752200-01 | Rice | plasma membrane | 53.3 | 53.98 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 30.46 | 53.33 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 52.28 | 52.82 |
| CDX86519 | Canola | extracellular | 25.63 | 51.01 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 10.91 | 48.31 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 57.61 | 48.09 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 13.45 | 46.9 |
| Solyc01g094090.2.1 | Tomato | cytosol | 35.53 | 42.55 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 39.09 | 40.63 |
| Solyc01g080930.2.1 | Tomato | cytosol | 39.34 | 40.47 |
| Bra030655.1-P | Field mustard | extracellular | 18.02 | 39.66 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 38.83 | 37.87 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 37.56 | 36.1 |
| Solyc05g018410.1.1 | Tomato | plastid | 21.32 | 28.0 |
| Solyc01g108790.1.1 | Tomato | nucleus | 11.93 | 26.7 |
| Solyc07g022880.2.1 | Tomato | cytosol | 8.12 | 22.22 |
Protein Annotations
| EnsemblPlants:Solyc07g044710.1.1 | EnsemblPlantsGene:Solyc07g044710.1 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 |
| SUPFAM:SSF52096 | UniParc:UPI000276C5E8 | UniProt:K4CEM9 | MapMan:50.3.1 | : | : |
Description
No Description!
Coordinates
chr7:+:57726957..57729914
Molecular Weight (calculated)
44943.1 Da
IEP (calculated)
7.291
GRAVY (calculated)
-0.378
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIISIPSST TMFPMPQQVL RRNKEVVMAE EMGCARMLTL NRPDNLNYIS AKVALALGQN FEKYENDDNA DFVIIKGAGR TFSAGGDLHM FYDGRNTRDS
101: GIECIYRMYW LCYHIHTYKK PHIALVHGMS VGGGASLMTP MKFSVVTEKA FSSTPEINIG FHPDCGFSYM LPRLPGRLGE YVGLTGEKLR GKEVVAAGLA
201: THFVPSQKLF QLEKRLMTLK NGDEDTIRSV INEFSSNIHI DERSILNKLS IINECFSKNS VEEIIESFEA EGNRKGNDWI MPVLKRLKRA SPTSLKITLR
301: SIREGRTQTI SECLRREFRI SINIQRGIIS GDFYEGIRAQ VIDKDKSPKW NPSTLDKVHD DQLDLIFKPF EDHDLELQIP VDEEELYRWR GKYE
101: GIECIYRMYW LCYHIHTYKK PHIALVHGMS VGGGASLMTP MKFSVVTEKA FSSTPEINIG FHPDCGFSYM LPRLPGRLGE YVGLTGEKLR GKEVVAAGLA
201: THFVPSQKLF QLEKRLMTLK NGDEDTIRSV INEFSSNIHI DERSILNKLS IINECFSKNS VEEIIESFEA EGNRKGNDWI MPVLKRLKRA SPTSLKITLR
301: SIREGRTQTI SECLRREFRI SINIQRGIIS GDFYEGIRAQ VIDKDKSPKW NPSTLDKVHD DQLDLIFKPF EDHDLELQIP VDEEELYRWR GKYE
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.