Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030656.1-P | Field mustard | cytosol | 97.56 | 99.72 |
| CDX86518 | Canola | cytosol | 79.67 | 76.76 |
| CDY15584 | Canola | cytosol | 78.05 | 75.99 |
| CDY15581 | Canola | cytosol | 55.56 | 75.09 |
| AT1G06550.1 | Thale cress | cytosol | 75.61 | 72.09 |
| CDX86519 | Canola | extracellular | 36.04 | 67.17 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 63.41 | 60.15 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 36.04 | 59.11 |
| Solyc07g043690.1.1 | Tomato | cytosol | 30.89 | 59.07 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 45.26 | 59.01 |
| Solyc12g011160.1.1 | Tomato | cytosol | 60.7 | 58.33 |
| PGSC0003DMT400020300 | Potato | cytosol | 60.16 | 57.81 |
| KRG98957 | Soybean | nucleus | 61.25 | 56.36 |
| KRH46020 | Soybean | vacuole | 60.43 | 56.03 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 49.59 | 54.95 |
| EES03617 | Sorghum | cytosol | 56.91 | 54.83 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 56.64 | 54.43 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 56.37 | 54.03 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 55.83 | 53.51 |
| Os01t0752200-01 | Rice | plasma membrane | 56.37 | 53.47 |
| PGSC0003DMT400079108 | Potato | cytosol | 49.05 | 52.62 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 55.28 | 52.31 |
| Solyc07g044710.1.1 | Tomato | plastid | 54.74 | 51.27 |
| Solyc06g054520.1.1 | Tomato | cytosol | 57.18 | 51.21 |
| PGSC0003DMT400041136 | Potato | cytosol | 47.15 | 50.14 |
| Solyc07g044740.1.1 | Tomato | cytosol | 17.62 | 50.0 |
| PGSC0003DMT400054311 | Potato | cytosol | 20.87 | 48.43 |
| Solyc07g043680.2.1 | Tomato | cytosol | 52.03 | 48.24 |
| Solyc07g044720.1.1 | Tomato | plastid | 54.2 | 47.51 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 53.39 | 46.14 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 49.86 | 46.0 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 57.18 | 44.7 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 28.18 | 43.33 |
| CDY71268 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 16.26 | 40.27 |
| CDY57769 | Canola | peroxisome | 36.31 | 35.92 |
| CDY55104 | Canola | cytosol | 36.31 | 35.64 |
| CDY45442 | Canola | mitochondrion | 31.44 | 35.05 |
| CDX97894 | Canola | peroxisome | 34.69 | 32.99 |
| CDY31775 | Canola | peroxisome | 34.15 | 32.9 |
| CDY31769 | Canola | peroxisome | 35.5 | 32.67 |
| CDY62818 | Canola | peroxisome | 35.23 | 32.42 |
| CDY23311 | Canola | mitochondrion | 35.5 | 31.95 |
| CDX67831 | Canola | mitochondrion | 34.69 | 31.84 |
| CDY39880 | Canola | mitochondrion | 35.23 | 31.71 |
| CDX98420 | Canola | mitochondrion | 34.42 | 31.59 |
| CDY45439 | Canola | plastid | 33.6 | 31.39 |
| CDY64934 | Canola | cytosol | 29.81 | 28.87 |
| CDX94817 | Canola | mitochondrion, plastid | 30.62 | 26.71 |
| CDX93011 | Canola | plastid | 30.62 | 26.71 |
| CDY72221 | Canola | mitochondrion | 14.91 | 26.44 |
| CDY01126 | Canola | mitochondrion, plastid | 29.54 | 25.83 |
Protein Annotations
| EnsemblPlants:CDY15583 | EnsemblPlantsGene:GSBRNA2T00089764001 | Gene3D:3.90.226.40 | GO:A0A078FTG1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003860 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 |
| PFAM:PF16113 | ProteinID:CDY15583 | ProteinID:CDY15583.1 | SUPFAM:SSF52096 | UniParc:UPI0004EED602 | UniProt:A0A078FTG1 |
| MapMan:50.3.1 | : | : | : | : | : |
Description
BnaA08g28670DBnaA08g28670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTG1]
Coordinates
chrLK032055:-:614689..619196
Molecular Weight (calculated)
41574.4 Da
IEP (calculated)
4.630
GRAVY (calculated)
-0.321
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQEGRNIDE QVVVGEQKGS VEWAILKRTR QLNTTASEEV LKLAEDLETW EKDDKTKLIV TQSAGDDVQM FYDGQFSSLN DIYTMYWLCY HIHTYKKTQV
101: AIVDGICNFG SASLMFAMKF SVVTEKIDFA TLEASLGFHT DCGFSYIHSR LPGHLGEFLA LTGTRLNGKE LVAVGMATHF VPSAKLVDLV ARLWSLDSGD
201: MDVVRSTIEE FSEKVELDKD SILNKLSIID KCCSKESVKQ IIQEFEAEGS KEGNEWVTPI MGFLKQSSPT GLKINLRSIR EGRKQTLAEC LKKEFRVSVN
301: ILRGTISNDA YEGARALTID KDNRPGWNPA TLDEVDDEKI NLVFLPLEDD IELRIPETED NRWGGKYET
101: AIVDGICNFG SASLMFAMKF SVVTEKIDFA TLEASLGFHT DCGFSYIHSR LPGHLGEFLA LTGTRLNGKE LVAVGMATHF VPSAKLVDLV ARLWSLDSGD
201: MDVVRSTIEE FSEKVELDKD SILNKLSIID KCCSKESVKQ IIQEFEAEGS KEGNEWVTPI MGFLKQSSPT GLKINLRSIR EGRKQTLAEC LKKEFRVSVN
301: ILRGTISNDA YEGARALTID KDNRPGWNPA TLDEVDDEKI NLVFLPLEDD IELRIPETED NRWGGKYET
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.